Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1283 ATGGCTGACCCTCCTTACTCCTCTCATCATCATCATCACCATAACAACAACTTCTTCTCTTCCTCTTCCTCTTCTTCCTCCTCCTCATCAGGACCACGCTTGTTCCAATTGAACCACCACAGCAGCAACCCAATCAACAATAATAGTAATAATAATCTCCAGCAGCACCACCATTTCCCAGCATCATCATCATCTAGTTATTATTATCCAGCTACTTCTTCAAACCACCTTTCTCCTTATAATTATAATTATAATTATAATAATTATTACCCTCATCATCAGCACAACAGCAATTACAGCTTGTTCCACCACATCAGAAACAACAGCAATTACAGCTTGTTCCAGCCTGGGCAGTACCTGCAGATCAGCGATGGTGCTACTAATAATAGCAGCAGCAGATCACCGCCTTCTCCTCCTCTGAGGAAAGAGCTCCCTCTCCTCACTCTCAGCCCAGCAAAGCAGCAGGCAGAGGAGGAGCAGCAGCAGGTACTAGCACTCTCCTCATCGCACCAACATCATCATCATCAACACCAGCCCCCTAATTACTCTTCCACTACGCCCATGGATGTAGAACTAGTCATCAAGCAGAGCAGCAGAGCCAACCCCAAAGCGGAGGAACATAATATTATTATTGAAGGAGGAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAGGAGGAAGAAGAAGGAAGTGTGACAGTTGCACTGCACATAGGGTTGCCAAGCCCTAGTGCAGCAGAGATGGCATCGGTGCTCATGTCCTGCTCCTCAAATTCATCAGGAGTAGCTGCTGCTGCTGCTGCGGAGAAAGAAGATAATAAGAATAAGAATGATGAAGGGGGTGGAGAAGATGAGGAGTCAACAACGACGACAATAATATCAGCAGCAGGGTTCATGGGGAACAGCAGGCTCAACAAGGGGCAGTATTGGATCCCTACGCCTTCCCAGATTCTCATTGGTCCTACTCAGTTCTCCTGCCCTGTTTGCTGCAAAACCTTCAACCGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCACAATACAGAAAAGGTCCAGAGTCGCTGAGGGGAACGCAGCCAACGGGAATGCTGAGGCTGCCATGCTACTGCTGTGCAGCGGGGTGCAGGAACAACATAGACCACCCGCGGGCAAAGCCGCTGAAGGATTTCAGGACGCTGCAGACGCACTACAAGAGGAAGCACGGGATAAAGCCCTTCATGTGCCGCAAGTGCGGGAAGGCCTTCGCCGTGAGGGGCGACTGGAGGACGCACGAGAAGAATTGCGGCAAGCTCTGGTACTGCATCTGTGGCTCCGACTTCAAGCACAAGCGCTCTCTCAAGGACCACATCAAGGCCTTTGGCACTGGCCATGCTGCTTATGGCCTCGACGCCTTTGACGACGATGACGAACCTGCTTCTGAAGTCGAGCAAGATTACAATAATATTAATATTAATAATCACTCCACCCACACCCACTAA 1503 0.4923 MADPPYSSHHHHHHNNNFFSSSSSSSSSSSGPRLFQLNHHSSNPINNNSNNNLQQHHHFPASSSSSYYYPATSSNHLSPYNYNYNYNNYYPHHQHNSNYSLFHHIRNNSNYSLFQPGQYLQISDGATNNSSSRSPPSPPLRKELPLLTLSPAKQQAEEEQQQVLALSSSHQHHHHQHQPPNYSSTTPMDVELVIKQSSRANPKAEEHNIIIEGGEEEEEEEEEEEEEEEEEEEEEGSVTVALHIGLPSPSAAEMASVLMSCSSNSSGVAAAAAAEKEDNKNKNDEGGGEDEESTTTTIISAAGFMGNSRLNKGQYWIPTPSQILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAAGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGTGHAAYGLDAFDDDDEPASEVEQDYNNININNHSTHTH* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1283 500 PANTHER ZINC FINGER PROTEIN WIP2-LIKE 117 490 - -
Aev06g1283 500 MobiDBLite consensus disorder prediction 122 137 - -
Aev06g1283 500 Coils Coil 204 237 - -
Aev06g1283 500 MobiDBLite consensus disorder prediction 275 289 - -
Aev06g1283 500 MobiDBLite consensus disorder prediction 122 238 - -
Aev06g1283 500 MobiDBLite consensus disorder prediction 1 65 - -
Aev06g1283 500 MobiDBLite consensus disorder prediction 269 294 - -
Aev06g1283 500 ProSitePatterns Zinc finger C2H2 type domain signature. 332 352 IPR013087 -
Aev06g1283 500 Gene3D Classic Zinc Finger 391 468 - -
Aev06g1283 500 ProSiteProfiles Zinc finger C2H2 type domain profile. 330 357 IPR013087 -
Aev06g1283 500 SUPERFAMILY beta-beta-alpha zinc fingers 396 434 IPR036236 -
Aev06g1283 500 SMART c2h2final6 330 352 IPR013087 -
Aev06g1283 500 SMART c2h2final6 414 434 IPR013087 -
Aev06g1283 500 MobiDBLite consensus disorder prediction 178 192 - -
Aev06g1283 500 MobiDBLite consensus disorder prediction 17 65 - -
Aev06g1283 500 MobiDBLite consensus disorder prediction 153 169 - -
Aev06g1283 500 ProSiteProfiles Zinc finger C2H2 type domain profile. 414 434 IPR013087 -
Aev06g1283 500 MobiDBLite consensus disorder prediction 211 236 - -
Aev06g1283 500 PANTHER ZINC FINGER PROTEIN WIP2 117 490 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1283 Aev-Chr6 8567394 8570519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1283 130 485 C2H2 Transcription Factor Family AT1G51220 52.778 7.89e-120 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev06g1283 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1283 - - cit:102624968 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1283 06 8567394 8570519 Aev06g1283 06 8567394 8570519 ECH
Aev06g1283 06 8567394 8570519 Aev10g1765 10 19679348 19681966 ECH
Aev06g1283 06 8567394 8570519 Aev04g3202 04 31408931 31415455 ECH