Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1281 ATGGAAGACTATGAAGTGATAGAGCAAATTGGAAGAGGAGCATTTGGTTCTGCCTTTCTGGTTCTTCACAAGTCTGAGAAAAAGAGGTATGTGCTGAAAAAGATTCGGTTGGCTAAGCAAACGGAGAAGTTCAAACGCACAGCACACCAAGAGATGAACCTGATTGCAAAATTAAATAATCCATATATTGTGGAGTACAAAGATGCTTGGGTGGAGAAGGAGGACCATATATGCATTATAACTGGCTATTGTGAAGGAGGAGACATGACCGAGAACATAAAGAAATCTCGAGGATCATATTTCCCTGAGGAGAAAGTCTGCAAATGGCTGACTCAATTGTTGATAGCCGTGGACTACTTGCACTCTAACCGTGTAATCCACAGAGATCTTAAGTGTTCCAACATATTCCTTACCAAAGACAACAGCATTCGGCTTGGTGACTTTGGTCTTGCAAAGCGACTTAATCCAGAAGACCTTGCTTCCTCGATTGTTGGAACTCCAAATTACATGTGTCCTGAGCTCCTGGCTGATATACCTTATGGTTACAAATCTGATATGTGGTCGCTTGGTTGTTGCATGTTCGAGATTGCTGCACATCAACCAGCATTTCGTGCTCCAGACATGTCTGGACTTATTAATAAAATAAACAGATCCTCCATTTCTCCATTGCCAATCGTATATTCTTCCACACTGAAACAACTTATCAAGAGCATGCTGAGGAAAAACCCAGAACACAGACCAACAGCAGCTGAATTGTTAAGGCATCCTCATTTACAACCTTATGTCCTCCGGTGTCAAAATGCAACTTCTAATTTTCTTCCAGTATACCCCTTAGTTAGCCCAAAGGATAAAACGAAAAGATCTTATAAATCTAGTGGTGGCAAGGATCATAGGGACAAAGAAGCAGGATTACTTAATCGTTTGGAACGTGTTCATCCAATTGAGGGTAATGGAGATGTCCAGCCAAGAAGTCTCCCGAGCGATGGGGAGCTTACAGTTTCAAGCAGTGCAGAAGCCGAAGACATCCTTGAGACCAAGAGGGTTGATCATACCACCTACACGGTGGAAACTTCTACTAGTACTAGTGGCTCAAAGGACGGGTCAACAACATCTGAATCGACTATTTGCAGTGTGTGCAAAGATCCAGACTTCAAAAGTAGACCTTCAAAGGAAACGGCAAACAGTGAGATTTCATTAAAGAGTACACAGGATTCTTTGCATGAAGAACATGCATTTGCTGCTGAACATCTTCTGAACTTAGAAGTGATCGACATAGATGCTGTGACAGCAGAAGTTGAAGATGCTTTTTTCATCCAAGTTCCTGATAATGCTGAAGCACATAGGGAAGATGCCAACCTTGAGGAGTCCAGGAAATCAACCACGTCCAGTGCAGGAAGTAGCATCACTGATAAAGATAAGTCGACTGATGAGGAAACACCACCGCTAGTTGTGCATCCTATTAGTGTTGAACACAATACTGATTCTGGAAACGACTTGAAGGAAAGCGTAAACCCGGATGCATTTAAAGACAGCTTGCGAGCGAATTGCTTGTCATCTGAGAGTAATGACACAGTTCCAGTTAAGGATGAAGACAGACCAACATTACACACAATTTGCTCCTCGCATAAGGAAGAAGATAATTGCATTGTGGTTGATAAGACACTGAGTGGAATTTCAGTGAGTATACCTGCTTCAAAATGTGGCGACGACACTGCCAAGTCTGAGTTGGATAGTCCATGCCAACAAAGAGCCGAGGCTCTTGAATCGCTGCTCGAGTTGTGTGCTCAGCTACTTAAGCAAGACAAGCTTGAAGAACTTGCAGCAGTGCTAAGACCATTTGGAAAAGAAGCTGTATCATCAAGAGAAACAGCAATATGGCTCACAAAGAGCCTTATATCAGCCCAAAAGTTCAATCCTGAAACCTAG 1926 0.4268 MEDYEVIEQIGRGAFGSAFLVLHKSEKKRYVLKKIRLAKQTEKFKRTAHQEMNLIAKLNNPYIVEYKDAWVEKEDHICIITGYCEGGDMTENIKKSRGSYFPEEKVCKWLTQLLIAVDYLHSNRVIHRDLKCSNIFLTKDNSIRLGDFGLAKRLNPEDLASSIVGTPNYMCPELLADIPYGYKSDMWSLGCCMFEIAAHQPAFRAPDMSGLINKINRSSISPLPIVYSSTLKQLIKSMLRKNPEHRPTAAELLRHPHLQPYVLRCQNATSNFLPVYPLVSPKDKTKRSYKSSGGKDHRDKEAGLLNRLERVHPIEGNGDVQPRSLPSDGELTVSSSAEAEDILETKRVDHTTYTVETSTSTSGSKDGSTTSESTICSVCKDPDFKSRPSKETANSEISLKSTQDSLHEEHAFAAEHLLNLEVIDIDAVTAEVEDAFFIQVPDNAEAHREDANLEESRKSTTSSAGSSITDKDKSTDEETPPLVVHPISVEHNTDSGNDLKESVNPDAFKDSLRANCLSSESNDTVPVKDEDRPTLHTICSSHKEEDNCIVVDKTLSGISVSIPASKCGDDTAKSELDSPCQQRAEALESLLELCAQLLKQDKLEELAAVLRPFGKEAVSSRETAIWLTKSLISAQKFNPET* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1281 641 MobiDBLite consensus disorder prediction 283 316 - -
Aev06g1281 641 CDD STKc_Nek 3 258 - -
Aev06g1281 641 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Aev06g1281 641 MobiDBLite consensus disorder prediction 352 377 - -
Aev06g1281 641 MobiDBLite consensus disorder prediction 282 402 - -
Aev06g1281 641 Gene3D Transferase(Phosphotransferase) domain 1 86 303 - -
Aev06g1281 641 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 483 624 - -
Aev06g1281 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Aev06g1281 641 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g1281 641 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 483 624 - -
Aev06g1281 641 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 1 479 - -
Aev06g1281 641 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Aev06g1281 641 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g1281 641 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 479 - -
Aev06g1281 641 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g1281 641 MobiDBLite consensus disorder prediction 447 504 - -
Aev06g1281 641 SUPERFAMILY Protein kinase-like (PK-like) 1 289 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1281 Aev-Chr6 8523262 8527789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1281 4 259 MAP Kinase Kinase Kinase AT3G13530 31.907 5.28e-37 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Aev06g1281 Pkinase 8.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1281 K08857 - gmx:100793379 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1281 06 8523262 8527789 Aev06g1281 06 8523262 8527789 ECH
Aev06g1281 06 8523262 8527789 Aev02g1536 02 17028925 17044642 PCT