Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1277 ATGGAGTCTCATGATGAGACAGGATGCCAGGCACCAGAACGTCCCATTCTCTGCATTAATAACTGTGGCTTCTTTGGAAGGCCTGCTACCATGAATATGTGTTCCAAGTGTTACAAGGACATGCTGTTGAGGCAGGAGCAGGACAAGATTGTTGCTTCATCAGTTGAAAACATCGTGAATGGTGGCAGTTCTAGCAACAATGGAAAACAGGTTGTGACCGCTAGCGCTGTTGATGTACAAGCTGGAACTGTGGAGGTCAAGGCAGTCAGTGCTGAAATTTCTGGGGATTCATCTTCTGTTGAGAGCTTGGAGGTGAAAGCCCGGACTGGTCCCAGCAGATGTGCCACTTGCCGGAAGCGTGTTGGTTTAACTGGTTTCAGCTGCAAATGTGGAAACCTATTTTGTGCGCTGCATCGGTACTCTGAAAAACATGACTGCCCTTTTGATTACAGGAGTGTCGCCCAGGATGCCATAGCAAAAGCCAACCCTGTGATTAAGGCAGATAAGCTCGACAAAATCTAG 522 0.4789 MESHDETGCQAPERPILCINNCGFFGRPATMNMCSKCYKDMLLRQEQDKIVASSVENIVNGGSSSNNGKQVVTASAVDVQAGTVEVKAVSAEISGDSSSVESLEVKARTGPSRCATCRKRVGLTGFSCKCGNLFCALHRYSEKHDCPFDYRSVAQDAIAKANPVIKADKLDKI* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1277 173 Gene3D - 88 169 IPR035896 -
Aev06g1277 173 SUPERFAMILY AN1-like Zinc finger 105 168 IPR035896 -
Aev06g1277 173 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Aev06g1277 173 SMART AN1_Zf_4 114 151 IPR000058 GO:0008270
Aev06g1277 173 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8 2 173 - -
Aev06g1277 173 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Aev06g1277 173 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Aev06g1277 173 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 173 - -
Aev06g1277 173 Pfam AN1-like Zinc finger 114 150 IPR000058 GO:0008270
Aev06g1277 173 ProSiteProfiles Zinc finger AN1-type profile. 108 154 IPR000058 GO:0008270
Aev06g1277 173 Gene3D - 1 69 - -
Aev06g1277 173 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1277 Aev-Chr6 8509793 8510314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1277 5 173 C2H2 Transcription Factor Family AT3G52800 41.520 2.67e-40 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1277 - - gmx:100499995 280.026