Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1268 ATGGATTCGAATTCCCGTTATCAGCTACAACAGCAGCAACCAAATTCTGGGTTGCTTCGGTTCCGCTCTGCCCCAAGTTCAGTCCTCTCAAATCTGGCACAAGGTGGAGCTGGAAATAGTAGTTCTGGTATGAATAACAAGGGTAATACTAATAGTAGTACTACCCCCCCTTGGGACGGTCCTTCTTCCGAGCCAGATAGGTTGGTTTTAAGGTTCTTGAACTCAAATGACAATAGCAGCAGCATGGATGCAGCTTCTCCTAGTTTGAGAGAGTTTCAGGACAAGCCTTCCGATAATAGTAATAGTAATAATAAGGATTGTTCAATAACGCCCTCTCTGAGCCTCATGAATTCTCAGCAGCAGCAGGGATATGTGCCTTCTCGTTTCATGAGGCACGGTTCTAATTCGAATGCGGCGGCTTCATCAATGGATTGTTCATTTGGGTTAATGGGTTCTGTCGGAATCGATCTTCACAGACAGAGCAGCTTCCCTGCACCAACTGGCCATTTCTCAAGCAACATCTCCTTTCAGAATGGGTACGATAGTATGAAAGGAGTTGGAAATTATGATGGGGTGAATGGCAGTGACAGTAATGAGCTGAGTCTATCTATGAACAGAGTGAATAACCAAATTAGCTTCTCATCATCGTCGTCGTCAAGAGGTCCTTCTTCCTTGGGAATTCTATCAAAATTGGGGAGTGAGGGAGGTGCCAATGATAATAATAATAATGGTGGATTCCATTATGGTTCTTGGAATAATAATAATGAAACATTGCACCTCTCAGAAAAACTCAGCTCCAAGAGGGACCGAAGTAGTAGTGATAAGTTATTTTCTGATGTTCATGATGGAGAGCTTGGACTATCGCATCAACTGAGTTTTTCAAAAGCCTCATCAGATATTTTTGCTATGGAGAATATGATTCAGTTCCCAGCAGATTCTGTTCCTTGTAAAATCAGAGCCAAGAGAGGCTGTGCTACTCATCCCAGAAGCATTGCTGAAAGGGTAAGAAGAACTCGGATTAGCGAACGGATGAGAAAATTGCAAGAGCTTGTTCCAAACATGGACAAGCAAACCAGCACAGCAGAAATGTTGGACCTGGCTGTTGTGTACATTAAAGATCTTCAGAAACAATTCAAGAAACTGAGTGAAAAGCGGGCTAAATGCAAATGTATAAGCATGCAGAACTCAGATTCGAATCATACTGCTTGA 1209 0.4276 MDSNSRYQLQQQQPNSGLLRFRSAPSSVLSNLAQGGAGNSSSGMNNKGNTNSSTTPPWDGPSSEPDRLVLRFLNSNDNSSSMDAASPSLREFQDKPSDNSNSNNKDCSITPSLSLMNSQQQQGYVPSRFMRHGSNSNAAASSMDCSFGLMGSVGIDLHRQSSFPAPTGHFSSNISFQNGYDSMKGVGNYDGVNGSDSNELSLSMNRVNNQISFSSSSSSRGPSSLGILSKLGSEGGANDNNNNGGFHYGSWNNNNETLHLSEKLSSKRDRSSSDKLFSDVHDGELGLSHQLSFSKASSDIFAMENMIQFPADSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTSTAEMLDLAVVYIKDLQKQFKKLSEKRAKCKCISMQNSDSNHTA* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1268 402 Gene3D - 325 396 IPR036638 GO:0046983
Aev06g1268 402 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 327 390 IPR036638 GO:0046983
Aev06g1268 402 Coils Coil 371 391 - -
Aev06g1268 402 MobiDBLite consensus disorder prediction 1 111 - -
Aev06g1268 402 SMART finulus 330 380 IPR011598 GO:0046983
Aev06g1268 402 MobiDBLite consensus disorder prediction 234 248 - -
Aev06g1268 402 MobiDBLite consensus disorder prediction 72 111 - -
Aev06g1268 402 PANTHER TRANSCRIPTION FACTOR BHLH130 10 394 - -
Aev06g1268 402 MobiDBLite consensus disorder prediction 1 60 - -
Aev06g1268 402 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 324 374 IPR011598 GO:0046983
Aev06g1268 402 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 10 394 - -
Aev06g1268 402 MobiDBLite consensus disorder prediction 212 226 - -
Aev06g1268 402 MobiDBLite consensus disorder prediction 212 248 - -
Aev06g1268 402 Pfam Helix-loop-helix DNA-binding domain 329 375 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1268 Aev-Chr6 8430301 8433671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1268 1 379 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 41.872 7.63e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev06g1268 HLH 4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1268 - - gmx:100796534 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1268 06 8430301 8433671 Aev06g1268 06 8430301 8433671 ECH
Aev06g1268 06 8430301 8433671 Aev10g1757 10 19612278 19614493 ECH
Aev06g1268 06 8430301 8433671 Aev04g3218 04 31496560 31499827 ECH
Aev06g1268 06 8430301 8433671 Aev02g0510 02 3832112 3835906 PCT