Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1259 ATGGCTTCCAGTAGTGTTAAGAGCACCAACCCAACATCAACCACTCATCATCATCATCAATTGGAACAACAACAACAACAACACCGTCATCATCTCTTTCATCATCATAATCAACCACAGCAGCATCAGATACAAGACCACCAAATTTCTTTTGGGATGATGCAATCTTCTTCATCTTCCTCTATCCCCGCACACTACTTAAACAAGGATGGTGGAGCATATGATTTGGGTGAATTGGACCAAGCCCTTTTTCTGTATCTGGATGGACAAACAGACCCATCATCAGGTGTTCAAGAACAAAGACAGATCAACTCATCAGCATCGTCATCATCAGGAATGAGACCTCCTACTCTTAACATTTTCCCTTCTCAGCCTATGCACGTACACCCATCATCATCCATTTCCAAGGGAAGCATGGATTTAGTTTCTGCACAAACCAGCAGTGGTTCCAAGAGACCAGTATCAGAGCCGTTGGAGTTGGCTAACCCAAGAAACGAACCCGCTTCTGCCCCTCAACCACCCAAACCTGTCAAGCAGCGAGAGAGCAACCGCAAGGGTCCAACTTCCAGCTCTGAACAAGAAGGACCAAAAACACCAGACCCCAAGACACTGAGAAGACTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGGAAAAAGGCATATGTTCAGCAGCTAGAGACGAGTAGGATTAGGCTGAATCAGCTGGAACAAGAGCTACAGCGTGCTAGAGCTCAAGGCATATTCTTCGGTGGAGGTGGTGGTGCACTTATGGGTGGAGATCAAGGCCTTCCTGTCGCCATTAATGCCATAAGCTCAGAGGGTGCAATGTTTGATGTGGAGTACGCGAGATGGGTGGAGGAGCAGCACAGGCTGGTGTGTGAGCTGAGAGCGGCAGTGCAAGAGCACCTTCCAGAGAACGAGCTTCGACTCTTTGTGGACAACTGCTTGGCACATTACGACCAAGTCATGAGCCTCAAGGCCTTAGTCGCTAAGGCCGACGTCTTCCATCTTGTTTCTGGCATCTGGAAGACCCCTGCTGAACGCTGCTTCATGTGGATCGGTGGATTCAGGCCTTCTCAACTCATTAAGATTATCGTGAGTCAAATTGAGCCTCTGACGGAGCAGCAAATACTGGGAATTTGTGGGTTGCAACAATCAACGCAAGAGGCAGAAGAGGCTCTGTCACAAGGGCTTGAGGCTCTGAATCAGTCTCTCTTGGACACTATCACTTCAGACTCTTTGACCTCTCCTCCCGTCATGGCTAACTACATGGGTCAGATGGCCGTTGCCATCAACAAGCTCTCCACTCTTGAAGGTTTCGTCAAACAGGCAGATGGGCTGCGGCAGCAAACGGTTCACCGTATGCATCAGATACTAACGACGCGTCAAGCGGCGAGGTGTTTTCTGGCGATAGCGGAGTACTTCCATCGCCTGCGAGCGCTGAGTTCTCTCTGGGTGGCCAGGCCTCGCCATGATTCATGA 1491 0.495 MASSSVKSTNPTSTTHHHHQLEQQQQQHRHHLFHHHNQPQQHQIQDHQISFGMMQSSSSSSIPAHYLNKDGGAYDLGELDQALFLYLDGQTDPSSGVQEQRQINSSASSSSGMRPPTLNIFPSQPMHVHPSSSISKGSMDLVSAQTSSGSKRPVSEPLELANPRNEPASAPQPPKPVKQRESNRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLETSRIRLNQLEQELQRARAQGIFFGGGGGALMGGDQGLPVAINAISSEGAMFDVEYARWVEEQHRLVCELRAAVQEHLPENELRLFVDNCLAHYDQVMSLKALVAKADVFHLVSGIWKTPAERCFMWIGGFRPSQLIKIIVSQIEPLTEQQILGICGLQQSTQEAEEALSQGLEALNQSLLDTITSDSLTSPPVMANYMGQMAVAINKLSTLEGFVKQADGLRQQTVHRMHQILTTRQAARCFLAIAEYFHRLRALSSLWVARPRHDS* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1259 496 MobiDBLite consensus disorder prediction 1 20 - -
Aev06g1259 496 Coils Coil 221 248 - -
Aev06g1259 496 Pfam Seed dormancy control 295 370 IPR025422 GO:0006351|GO:0043565
Aev06g1259 496 Pfam bZIP transcription factor 202 236 IPR004827 GO:0003700|GO:0006355
Aev06g1259 496 MobiDBLite consensus disorder prediction 92 153 - -
Aev06g1259 496 MobiDBLite consensus disorder prediction 1 45 - -
Aev06g1259 496 ProSiteProfiles DOG1 domain profile. 277 491 IPR025422 GO:0006351|GO:0043565
Aev06g1259 496 PANTHER TRANSCRIPTION FACTOR TGA9 87 494 - -
Aev06g1259 496 MobiDBLite consensus disorder prediction 92 205 - -
Aev06g1259 496 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 200 244 IPR004827 GO:0003700|GO:0006355
Aev06g1259 496 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 205 220 IPR004827 GO:0003700|GO:0006355
Aev06g1259 496 SUPERFAMILY Leucine zipper domain 202 244 IPR046347 GO:0003700|GO:0006355
Aev06g1259 496 Gene3D - 201 250 - -
Aev06g1259 496 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 87 494 - -
Aev06g1259 496 SMART brlzneu 198 286 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1259 Aev-Chr6 8372968 8380283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1259 64 495 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 63.758 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aev06g1259 DOG1 9.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1259 K14431 - gmx:100815176 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1259 06 8372968 8380283 Aev06g1259 06 8372968 8380283 ECH
Aev06g1259 06 8372968 8380283 Aev02g1570 02 17330377 17345006 PCT