Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1251 ATGGGTCCACCGGGAACTGCCACCAAACAGCAACCATCCTCCTCCCCTACAAGCCACTCTTCATCCTTCAATGGCTTGAAATTCGGCCAAAAAATCTATTTTGAGGATGTGGGAGTGTCCTCCACCACTCCCGCATCTTCCTCTGCTGGTCCGAAGAAGGGTAGAGGAGGAGGCTCTGTCAGCCCTGCTCTGCCACCGAGGTGCCAGGTTGAAGGTTGCAATGCAGATCTGAGTGATGCTAAGGCTTACTATTCTAGGCATAAAGTCTGTGCCATGCACTCCAAATCACCTTCTGTCCTTGTAGCTGGACTCCAACAAAGGTTTTGCCAACAGTGTAGCAGATTTCATCAGCTTCCTGAATTTGATCAAGGGAAAAGAAGTTGTCGCAGGCGACTTGCTGGCCATAATGAGCGTCGGAGAAAGCCAGCACCTAGCTCCCTCTTAACCTCTCGTTACTCGAGACTTTCTTCATCTATCTTTGGTCAGGAACTATCAGTAATTCATCAATTTCAAATCTCTCAATTTTTCTATCTGTGGTGGATTACCAATGCTAATATTCCTGAGATTATGCAAAACAAATTAAAATGTTTGGCACTTCCTTTGACAGATAACAGTGGCAAAAGTGGCAGCTTCCTGATGGGATTTGCCTCATACCCAAAGCTGAGTCTGAGAACTTCACTTCCACATCCCAGATCATCCGAACCAGTTAGCTGGCAGGGCTATTCAGAGGTACCCTCTGACTTTTTCCTGCAAGGTTCAATGGACGGGACAAGCTTCCGTGGTCCCAGACACCCTCCTCAGCCCGCTGGTGGCGTCGCAGACTCAAGCTGTGCTCTCTCTCTTCTGTCAAGTCAAGCATGGGGTTCTAGTAACACGGCACCAAGTCTTGGGTTAAACAACATGTGGAATTTCAACTGCACACCCATGACTCAACTTGCTGCATCTTCTAACCATGCACCAATACATCAACTTCCAAATACCTCATGGTGTTTCAAGGGAGTTGATCCCCATAACTGTTCAACCGATGCTGTACCTGATCTAGGCCGTGGTCAAATCTCGCTGCAGCTTCACGGCGAGCTCGACGACATGCCGCAACCAGGTAGGCGGAATTATATGGATCCAGGGCAGTCCGAGACCTATGAATCTCCTCAGTGGTCACTTTGA 1164 0.4854 MGPPGTATKQQPSSSPTSHSSSFNGLKFGQKIYFEDVGVSSTTPASSSAGPKKGRGGGSVSPALPPRCQVEGCNADLSDAKAYYSRHKVCAMHSKSPSVLVAGLQQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPAPSSLLTSRYSRLSSSIFGQELSVIHQFQISQFFYLWWITNANIPEIMQNKLKCLALPLTDNSGKSGSFLMGFASYPKLSLRTSLPHPRSSEPVSWQGYSEVPSDFFLQGSMDGTSFRGPRHPPQPAGGVADSSCALSLLSSQAWGSSNTAPSLGLNNMWNFNCTPMTQLAASSNHAPIHQLPNTSWCFKGVDPHNCSTDAVPDLGRGQISLQLHGELDDMPQPGRRNYMDPGQSETYESPQWSL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1251 387 MobiDBLite consensus disorder prediction 1 24 - -
Aev06g1251 387 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 17 8 162 - -
Aev06g1251 387 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 17 195 383 - -
Aev06g1251 387 ProSiteProfiles Zinc finger SBP-type profile. 65 142 IPR004333 GO:0003677
Aev06g1251 387 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 8 162 IPR044817 GO:0003677
Aev06g1251 387 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 195 383 IPR044817 GO:0003677
Aev06g1251 387 MobiDBLite consensus disorder prediction 358 387 - -
Aev06g1251 387 Pfam SBP domain 68 141 IPR004333 GO:0003677
Aev06g1251 387 Gene3D - 59 129 IPR036893 GO:0003677|GO:0005634
Aev06g1251 387 SUPERFAMILY SBT domain 66 147 IPR036893 GO:0003677|GO:0005634
Aev06g1251 387 MobiDBLite consensus disorder prediction 40 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1251 Aev-Chr6 8329039 8331589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1251 26 387 SBP-box Gene Family AT2G42200 38.693 2.48e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aev06g1251 SBP 6.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1251 - - gmx:100780949 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1251 06 8329039 8331589 Aev06g1251 06 8329039 8331589 ECH
Aev06g1251 06 8329039 8331589 Aev02g1581 02 17441134 17445086 PCT