Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1250 ATGTGCAAAAACTCACCTTATTTCCTCCACGATCTTCTGAATAAGGTTCAGAAGAATAATCTGGATGATTGTGGTGACATCAAGAAATCGACTTCGCGCTACTTGCGTTACCACCCCATCAATGAGTTCGAGCCTTTCTTCGAGAGCTCGGGTTTGAAGCCTTTTGAGTACATGCACCTTCTTCCGAGGGACATGATCTTCTTGGACGATGACAGGGTATTGATGGAGAATTACCGCACCCTTTGTAACTACGGTGTTCCCAGGAGCAAGATAGGGAAGATATTCAAGTTTGCACCTGAGATTTTCCGCTACAGACGTGGGGTTTTGAGTTCCAAACTTAAGTGTTATGAGGAGCTTGGTGTTGCTTCTTCTACTCTCGTGAAGGTCGTTGTTTTGAGCCCTAGGGTTTTGGTTGGGAATGTTGACCTTTGTTTTGTTGAGGTTGTTGAGAAGTTGAAGAATCTTATTGGAAAAAAGGGAGATGGTTGGATTGAGGGAAATTTGTTGGATGCAAGTTGTTGTAATTGGGATCTTATGCTTGAGCTCTTGTGCTTGCTTGAGAAGGTTTATAGTGACAAATGTTTGTTGGGTGAGATGATTGATCAGCACCCTTGTCTTGTTTTTGAGGATTCTGGGGGTAGGACATTGTCCCTCGTTGGGTTTTTGTTGAAGTTCGGGTTGTCCATGGACCAGATATGTCTCATGTTTGCGGAGCTTCCACAGATTGGGATCTCGAAGTTCCTGTCAAATTTAAAGCAGTGTTTTGTGTTCCTGTGTGATATCGAGATGGAGGCTGCAGAGATCAGGAAGGTTTTCCAGTCTCAGTCCTTGTTGATGGGTTCTTCCAAGCTGAAGAAAACTAGCAGTTTGCTTGGGAGCTTGAATGTTGGCAAGAAAAGGCTGTGTAAGATTGTGCAGGATAATCCAGAAGAAATGAAGAATTGGGTTCTGGGGAAGAAAACTCAGCCATTGGTGAACTCTGATGAGGAGAATAAATCGAAGGAGCTGAAGACAGAGTTCTTGATCAGTTTGGGGTATGAAGAGAACTCGAAGAAAATGGAAGAGGCTTTCAAGCTATTTAGAGGTAAGGGAGATGAGCTCCAGGAGAGATTCAATTTTATCGTTAAAGCCGGGTTAGATTATGAGGATGTTCGCAGGATGATTAGAGTTTCACCTCAGATTCTTAATCAGACCACAGACAAGATCAGCATGAAAATTGAGTATCTTGTAAATGAAGGTTATCCTATATCAAGTTTAGTGAATTTCCCATCCTTTCTTTCCTATACATCTGGTAGAGTTAAGCTTAGGTTATCAATGTATAATTGGCTCATAGACCATGGAGCTGCAGATTCTGGGCTTGCTCTGAGCACTGTAATTGCGTGCTCAGAGAAACTATTCATACAGCAATTTTCTGCAAATGGGTTTTGTTTGAGATGCATAACGTCGATACATGATACCAGATTTCCTGTAGAGATTTTTTGTGCATTTTGTCAACAAGGTCCTTTTGCTATGGGTAGAGGCAGAGGGAAAGGGAAGAAGCAATCTGTTATTGTTGATAAGGACGATCCTGGAAGTGGCGAAGACGAAAAACTCTCAGCTAACAGAAGAAGAGGAAGACCTATAAAACCACTGATGGATGATATTGAACAAGTAGAAGTAACCGAAAAGATAGAAAAAGATGAGGAGAATGTGAATGGTAATGTTTCCAGCAAGGATTTGAAAACTCAGCCTATCACAGTTAATAAAAAGAAAAGGAAGAGGTCTGTGCAGGTTAAAGAAAAGCCGGATGCAGTGAAAGAAGAGGGTGGCATCCGAGTAAAGTCAACGCCAGATGAGTCGGTGAAGCCTGCCGGATTCCGACAGAATGGAAGCAGGCGTAAAAATAAGCCTCGCCGTGCTGCTGAAGCCGGTGTAGAATGCAAGTGA 1926 0.4263 MCKNSPYFLHDLLNKVQKNNLDDCGDIKKSTSRYLRYHPINEFEPFFESSGLKPFEYMHLLPRDMIFLDDDRVLMENYRTLCNYGVPRSKIGKIFKFAPEIFRYRRGVLSSKLKCYEELGVASSTLVKVVVLSPRVLVGNVDLCFVEVVEKLKNLIGKKGDGWIEGNLLDASCCNWDLMLELLCLLEKVYSDKCLLGEMIDQHPCLVFEDSGGRTLSLVGFLLKFGLSMDQICLMFAELPQIGISKFLSNLKQCFVFLCDIEMEAAEIRKVFQSQSLLMGSSKLKKTSSLLGSLNVGKKRLCKIVQDNPEEMKNWVLGKKTQPLVNSDEENKSKELKTEFLISLGYEENSKKMEEAFKLFRGKGDELQERFNFIVKAGLDYEDVRRMIRVSPQILNQTTDKISMKIEYLVNEGYPISSLVNFPSFLSYTSGRVKLRLSMYNWLIDHGAADSGLALSTVIACSEKLFIQQFSANGFCLRCITSIHDTRFPVEIFCAFCQQGPFAMGRGRGKGKKQSVIVDKDDPGSGEDEKLSANRRRGRPIKPLMDDIEQVEVTEKIEKDEENVNGNVSSKDLKTQPITVNKKKRKRSVQVKEKPDAVKEEGGIRVKSTPDESVKPAGFRQNGSRRKNKPRRAAEAGVECK* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1250 641 MobiDBLite consensus disorder prediction 590 608 - -
Aev06g1250 641 SMART mt_12 233 264 IPR003690 GO:0003690|GO:0006355
Aev06g1250 641 SMART mt_12 416 449 IPR003690 GO:0003690|GO:0006355
Aev06g1250 641 SMART mt_12 385 415 IPR003690 GO:0003690|GO:0006355
Aev06g1250 641 SMART mt_12 92 122 IPR003690 GO:0003690|GO:0006355
Aev06g1250 641 SMART mt_12 127 159 IPR003690 GO:0003690|GO:0006355
Aev06g1250 641 SMART mt_12 197 228 IPR003690 GO:0003690|GO:0006355
Aev06g1250 641 MobiDBLite consensus disorder prediction 505 641 - -
Aev06g1250 641 Pfam mTERF 192 345 IPR003690 GO:0003690|GO:0006355
Aev06g1250 641 Pfam mTERF 81 309 IPR003690 GO:0003690|GO:0006355
Aev06g1250 641 Pfam mTERF 332 466 IPR003690 GO:0003690|GO:0006355
Aev06g1250 641 Gene3D Transcription termination factor 3, mitochondrial 214 474 IPR038538 -
Aev06g1250 641 PANTHER CGI-12 PROTEIN-RELATED 1 470 IPR003690 GO:0003690|GO:0006355
Aev06g1250 641 PANTHER MITOCHODRIAL TRANSCRIPTION TERMINATION FACTOR-RELATED 1 470 - -
Aev06g1250 641 MobiDBLite consensus disorder prediction 512 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1250 Aev-Chr6 8320423 8326294 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev06g1250 mTERF 3.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1250 - - lja:Lj1g3v4317450.1 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1250 06 8320423 8326294 Aev06g1250 06 8320423 8326294 ECH