Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1247 ATGAAAGAGAACAAGATTATTGATTGCCATGGACTGATTCAACAAAGCCATGGACTAAATGGGGATTTCTGTGGAAACCGTTCTTGTCAATATTTTGATAGCAGAACAATACAGGGTAGTAGTTGGAATAATGTTGGAGCTTGCAACAATCAGCAACTTGCTATGGCTGGAGTTGGAGGATCAGAACAGCCACAACAACCACTGTCATCCTCTGCCACAATCATGAGCCGTTTCGAGTCGCCGGCTTCCGCTTTCTATGCAGCAGAACTCTGCATGGGGTTTGCAGAATATGATTGCCTAGGTGGTGGTGGTGGCAACAATAGTCAATCTTTGAGTACTAATCAGTTCTCTAAGGAGGTAAATGATTTTGAGTTCCCTTTGTATCAGTCTCCAAGGGAAAACATTTTCTTGGAATCAGAAAACCAATCATCCGAGGCCAACTCTGAGTCGTCCAACACTTTGCAAGCTATGGTGAAATCTCAATTCAATAGAAATCAATGCAGCAGATCCAATAAAACCCCATTTGGGAATTTTCCTGGCAGCTTGTTCCTCCCTATTGAACAACAAAAGCTCTTCACTGGTGCTGCTGCCTCAGTTAGCATCAGATCATCATTTCCTGTTAAGGGAAATCAGGATCATATGGTTGGTTGTGGATCTTATAACTTGCCTCATGCGCAGCTGAGCTTCTCTTCTCATCAAGACAGGTCTTCTACACTTTCAGCAGCAAGTATGTCATCTAGTTCTGGAAACCCTGCATCTAATGGGGCAATTGTCTCGAGTAAAACGCGCATAAGATGGACTCAGGATCTTCATGAGAAGTTTGTTGAGTGCGTCAATCGTCTTGGGGGTGCTGATAAGGCAACACCAAAAGCTATATTGAAGATGATGGACTCAGATGGATTGACCATCTTCCATGTCAAAAGTCATCTGCAGAAATACAGAATTGCAAAATACATGCCAGAGTCACCTCAAGGGAAATCTGACAAAAGAAACCATATAGAGGATGTGCAACATCTTGATGCCAAAACTGGATTGCAAATTAGAGAAGCACTTCAGCTGCAATTAGATGCTCAAAGGCGTCTTCATGAACAGCTAGAGATTCAGAGGAAGTTACAGCTGCGAATCGAGGAACAAGGTAGGCAGCTGAAAAGGATGTTCGACGAGCAGCAGAAGACAACGAATAGCCTCTTGAATTGCCAGAACAATGCCAATGATGATACACCAATTACTAGTCTCCAAGATGTGGTTGGGGTTTCAATTCCTGAAGGGCCTTGA 1275 0.4329 MKENKIIDCHGLIQQSHGLNGDFCGNRSCQYFDSRTIQGSSWNNVGACNNQQLAMAGVGGSEQPQQPLSSSATIMSRFESPASAFYAAELCMGFAEYDCLGGGGGNNSQSLSTNQFSKEVNDFEFPLYQSPRENIFLESENQSSEANSESSNTLQAMVKSQFNRNQCSRSNKTPFGNFPGSLFLPIEQQKLFTGAAASVSIRSSFPVKGNQDHMVGCGSYNLPHAQLSFSSHQDRSSTLSAASMSSSSGNPASNGAIVSSKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKMMDSDGLTIFHVKSHLQKYRIAKYMPESPQGKSDKRNHIEDVQHLDAKTGLQIREALQLQLDAQRRLHEQLEIQRKLQLRIEEQGRQLKRMFDEQQKTTNSLLNCQNNANDDTPITSLQDVVGVSIPEGP* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1247 424 Pfam Myb-like DNA-binding domain 265 314 IPR001005 -
Aev06g1247 424 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 260 318 IPR017930 -
Aev06g1247 424 MobiDBLite consensus disorder prediction 231 257 - -
Aev06g1247 424 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 68 411 - -
Aev06g1247 424 SUPERFAMILY Homeodomain-like 259 315 IPR009057 -
Aev06g1247 424 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 261 316 IPR006447 GO:0003677
Aev06g1247 424 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 68 411 IPR044848 GO:0003700
Aev06g1247 424 Pfam MYB-CC type transfactor, LHEQLE motif 345 392 IPR025756 -
Aev06g1247 424 Gene3D - 260 319 - -
Aev06g1247 424 Coils Coil 348 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1247 Aev-Chr6 8302652 8304807 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1247 251 412 G2-like Transcription Factor Family AT3G04450 52.976 4.85e-50 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev06g1247 Myb_DNA-binding 4.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1247 - - gmx:100527766 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1247 06 8302652 8304807 Aev06g1247 06 8302652 8304807 ECH