Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1237 ATGAGAATGGAGTCTGAGAACATGAGCCTCCGCAGATTGCAGTGCACCTATGGCTCCTTGGATGAATCGTTTCAAATCGTGAAAGAGACGTATCATGGGCAGCAATACAGTAACATATACTTCGCTCGACTTCACCTGATGCGCACTCTCTTGTATTCCCTTGTCTCCCATTGGAAACCCCATTCACCAGTGTGCACTGTTCTGGGATTGGAACAGGGGAAAGAGTGTGTCATTGTTGGGACCCTCTACAAACACATGAAGCTCAAACCTTGCATACTTGATGAGTATTCCAAGGAGAGATCTGCGGTTCCACTTGTCAGCCCTTGTAACTTCGTGCACCAGGATGATTATCTAGTGTTGGAGGATGAAAGTGGGAGAGTTAAGCTTGGCGGGGATCTCATTTCTCCTTCTGTGTATGTTACAGGAATTGTTGTTGCTTTACATGGAAAGGAAACGGGGGCAGGCGAGTTTTCGGTTCTGGATGTCCTAGAAGCTGGCCTACCACCACAGATAGAATTTCCTCTTAAATCACGGGAAGACAAATATGTGGTTCTTGTGTCTGGGTTAAGTGTTGGGAACAGTAACTCTAATCCTCTTCAGTTTCAGCTTCTCATTGATCATATTACTGGGCATTTAGGAGATGAGAAGGAGCAAAGTATTGCATCTCAAATTGTCCATGTTGTCATTGCTGGGAATTCTGTTGAGATACCACGTGGACTGATTAATGGACAGAATTTGGCTTCAAAGGATCTCTCAAGGATAGCTGAACCTATAAAGGAACTGGATATTTTGTTGAATCAGATTGCTACTGGTCTGCCTTTGGATATCATGCCAGGACCCAATGACCCTGCTAATTTCGCATTACCACAGCAGCCTTTGCATAGATGCCTTTTTCCTGGGTCATCAGCTTATAACACCTTTAGATCTTGTACAAATCCTCACTTTTTTGAGATTGATAATATCAGGTTTCTTGGGACATCAGGTCAGAATGTTGATGATCTTGAGAAGTATTCTGAGGCAAAAGATAAACTTGAATTCATGGAAAGGACACTAAGATGGAGGCACTTGGCACCCACGGCACCTAATACTCTTGGGTGCTTTCCTTATACTGATAGGGATCCCTTCTTCATTGAGAGCTGCCCTCATGTGTATTTTATTGGCAATCAGAATAAATATGAATCTCGTGTGATAAAGGGATCAGAAGGGCAGTTGGTGAGACTCATTTGCGTTCCTAAATTTAGTGAATCTGGAGTTGCAGTTATGGTAAATTTGAGGGATCTTGAATGCCATGCTATCAGTTTTGGAACTCAGTTCAGCTCATAA 1323 0.4316 MRMESENMSLRRLQCTYGSLDESFQIVKETYHGQQYSNIYFARLHLMRTLLYSLVSHWKPHSPVCTVLGLEQGKECVIVGTLYKHMKLKPCILDEYSKERSAVPLVSPCNFVHQDDYLVLEDESGRVKLGGDLISPSVYVTGIVVALHGKETGAGEFSVLDVLEAGLPPQIEFPLKSREDKYVVLVSGLSVGNSNSNPLQFQLLIDHITGHLGDEKEQSIASQIVHVVIAGNSVEIPRGLINGQNLASKDLSRIAEPIKELDILLNQIATGLPLDIMPGPNDPANFALPQQPLHRCLFPGSSAYNTFRSCTNPHFFEIDNIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCFPYTDRDPFFIESCPHVYFIGNQNKYESRVIKGSEGQLVRLICVPKFSESGVAVMVNLRDLECHAISFGTQFSS* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1237 440 Pfam DNA polymerase delta subunit OB-fold domain 35 162 IPR040663 -
Aev06g1237 440 CDD MPP_PolD2_C 182 434 IPR041863 -
Aev06g1237 440 Pfam DNA polymerase alpha/epsilon subunit B 183 391 IPR007185 GO:0003677|GO:0006260
Aev06g1237 440 Gene3D - 174 439 - -
Aev06g1237 440 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 3 434 IPR024826 -
Aev06g1237 440 Gene3D - 41 165 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1237 1 439 Core DNA Replication Machinery Family AT2G42120 75.626 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1237 K02328 - gmx:100780072 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1237 06 8244383 8248723 Aev06g1237 06 8244383 8248723 ECH