Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1234 ATGCTAGCGTGGCTGGCAAATGTGGCAACGGCGTGCTGGCTGCGGACGACGTGCAGAGACATGCTGGATCTGGACAATGATGACCCTCTCGTGTGGACAAGGGACCTCGAGCAGCACTCCTGCGGTGAATACTCCTTCGCTGTCTGTCAGGCCAACGGGGTCCTCGAGGATTTCAGCCAGGTCGACACCGGCACCAATGCCACTTTCGTCGGCATCTACGACGGCCACGGTGGCCACGAGGCCGCCGAGTTCGTCCGTGACCACCTCTTCAACGAACTAATCCAGATTACTCGGAATAAGAATAATATGGGTCAAGGAACTCTGGGTGTAGCTATAGCCAATACAGAGAGAGATTTTCTGCAATTGGTTCGAAATGAGGGAAGAGAGAGGCAAAACTTGGTATCGGTGGGAACGTGCTGCCTTATTGGAGTGATATGGAGAGGGACCCTGTTGATCGGCAATCTTGGGGACTCGCGTGCCGTGATGGGCTACTTCAACCATGAACAGAAGATCAGTGCAGAGCCCATCACCCATGACCACAATGTCAACCTCGAGCAGATCAGAAGAGACCTCAGCGCCACCCACACAGACGATACAAATCTCGTGGTTTTCAGAAATGGAGTGTATCGGATCAAAGGCATCATCCAGGTCTCGAGGGCCATCGGAGACGCCTTCTTGAAGAGCCGCGAATTCAAAGCCGATCCAACACAGCCAAAGCTCCGAATGTCTGCACCTCTCGGGAACCAGCCAGCAGTGGACTCGACTCCAGACCTCTTCACAAGAGGTTTCAGGCGGCAGGACCGGTTCCTTATATTCGCGTCGGACGGGCTCTGGGATCAGCTGTCGAGCCAGAGAGCCGTGGAGATCGTCCACAAGTACCCGCGGCAGGGGATTGCGAGGAGGCTTATCAAGGCTGCTCAGAGCGAGGCGGCGAAGAAGGCCAACCTCGCATTGCAGGCACTTTACGATGTTCCAGTGGGAGATCGGAGGGAAATCCACGATGATATGACAGTCGTCGTTGTGTACATAAACAATGAGCTCCTTAGCCACAAAATTGACACCACACCCGTCACCTCCATCAGAGGCTTCGATGATGCCGTTGCAGAGTCAGGTTTTGTAACTATAGACGACTTGATGTGA 1140 0.5421 MLAWLANVATACWLRTTCRDMLDLDNDDPLVWTRDLEQHSCGEYSFAVCQANGVLEDFSQVDTGTNATFVGIYDGHGGHEAAEFVRDHLFNELIQITRNKNNMGQGTLGVAIANTERDFLQLVRNEGRERQNLVSVGTCCLIGVIWRGTLLIGNLGDSRAVMGYFNHEQKISAEPITHDHNVNLEQIRRDLSATHTDDTNLVVFRNGVYRIKGIIQVSRAIGDAFLKSREFKADPTQPKLRMSAPLGNQPAVDSTPDLFTRGFRRQDRFLIFASDGLWDQLSSQRAVEIVHKYPRQGIARRLIKAAQSEAAKKANLALQALYDVPVGDRREIHDDMTVVVVYINNELLSHKIDTTPVTSIRGFDDAVAESGFVTIDDLM* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1234 379 Pfam Protein phosphatase 2C 53 312 IPR001932 -
Aev06g1234 379 PANTHER ALPHABET, ISOFORM E-RELATED 8 363 - -
Aev06g1234 379 SUPERFAMILY PP2C-like 48 345 IPR036457 -
Aev06g1234 379 CDD PP2Cc 44 343 IPR001932 -
Aev06g1234 379 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 8 363 - -
Aev06g1234 379 ProSiteProfiles PPM-type phosphatase domain profile. 40 343 IPR001932 -
Aev06g1234 379 SMART PP2C_4 37 341 IPR001932 -
Aev06g1234 379 ProSitePatterns PPM-type phosphatase domain signature. 69 77 IPR000222 GO:0043169
Aev06g1234 379 Gene3D - 26 354 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1234 Aev-Chr6 8237414 8238644 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1234 1 372 PP2C-type Phosphatase Gene Family AT5G06750 47.436 5.16e-123 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1234 K01102 - pda:120106829 378.252