Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1163 ATGACCATCTCAATGGTACTGTGCAGACCAACACCACCAATGATAAATGTTCCATGCAGTAATGCCCCAAAACTCATGAACGTGAAGCAGAAAGAGAAGGTAGTGTTGGTCATGGGAGCAACAGGAACAGGCAAATCAAGGCTTTCAATCGACCTTGCCTCGTGTTTTCCATCAGAAATCATCAATTCAGACAAGATCCAAGTCTATGAAGGGCTCGACATAGTCACAAACAAGATCACAAAGGAAGAACAACGTGGGGTGCCACACCATTTGCTAGGAACAGAGGACCCAAACTCGGATTTCACAGTCACTGATTTCTGTAATAAGGCCTCAACTGCAATTGAATCAATCACGGGTCGTGAACAGCTTCCAATAATAGTTGGAGGATCCAACTCTTACATTGAGGCCTTGGTTGAGAAATTCGGGTCAAGGTATGATTGGTGTTGCCTCTGGGTGGATGTGTCAATGCCTATTCTTCATTCCTCTGTTTCACAACGTGTTGATCAAATGTTTGACAATGGAATGGTGAATGAGTTAAGACCCTTTTTCAGTCCCAATGGGGACTACTCAACAGGGATAAGAAAAGCAATTGGGGTGCCCGAATTCGACACCTTTTTTCGAAGCGAAGCATTGATCTCTGAGGAGGAAACGAAACAGAGGTTGCTGAATGAAGCAGTATGTGAAGTGAAAGGGAACACTTGCAAACTGGCAATGAAACAAATGGAGAGGATTCAGAGGTTAAGGAGTGTTAAGAGGTGGAGGATGCATCGGTTGTGTGCCACAAAAGTGATTCAGATGAATGGCAAAGGTGCTGATGATGATGCTTGGAAGATGATGGTGGCAGAGCCAAGTGTAAGGGTAGTTGAAGAGTTTCTGTACAATGGCAACATTTTTTCGTCTGGGATTAGAGTGCCAGCAGCTTCTTCTAACAGTCTTGTTGTTGCTGCTACTGCAACATGCATGTTATGA 969 0.4417 MTISMVLCRPTPPMINVPCSNAPKLMNVKQKEKVVLVMGATGTGKSRLSIDLASCFPSEIINSDKIQVYEGLDIVTNKITKEEQRGVPHHLLGTEDPNSDFTVTDFCNKASTAIESITGREQLPIIVGGSNSYIEALVEKFGSRYDWCCLWVDVSMPILHSSVSQRVDQMFDNGMVNELRPFFSPNGDYSTGIRKAIGVPEFDTFFRSEALISEEETKQRLLNEAVCEVKGNTCKLAMKQMERIQRLRSVKRWRMHRLCATKVIQMNGKGADDDAWKMMVAEPSVRVVEEFLYNGNIFSSGIRVPAASSNSLVVAATATCML* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1163 322 Pfam IPP transferase 67 141 - -
Aev06g1163 322 Pfam IPP transferase 144 244 - -
Aev06g1163 322 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 25 296 - -
Aev06g1163 322 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 156 255 - -
Aev06g1163 322 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 25 296 IPR039657 -
Aev06g1163 322 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 146 IPR027417 -
Aev06g1163 322 Gene3D - 31 292 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1163 Aev-Chr6 7774646 7775614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1163 142 292 C2H2 Transcription Factor Family AT2G27760 29.944 8.10e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1163 K10760 - gmx:100777757 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1163 06 7774646 7775614 Aev06g1163 06 7774646 7775614 ECH
Aev06g1163 06 7774646 7775614 Aev02g0629 02 4925577 4926569 PCT