Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1162 ATGGAAGGACAAAGTGACCAAGAGAATCCTTTGCAGAAAATGTTTTTTACCTCTGGAGGAACCATTAGCCATGCTTCTGGTTCAGCTGTTGAGGATGATGATCAAAGCATGCAACAAGATGTTGTAGCTGAAAGGAGTGGTAGCCAGTGGACTTGCCTCCCAAAACAATCTCAAAACTATGTTCAATATCTGACTGAATCCTCAACTTATCTGCCAAAGACTGAAGTAGATATGATTGGGAGCAATTATGCACCTATTGATGAAACAAACAAAAACTTATTTTATAATGACCCAGGAAATGGTTGTGGCTTAAAAACTAGTGATCATTCTTCCACTGAAGTAGATATTGGGAAGCAGGTGGGGTTTTGGAGAATTAATGAAAGTGAGGTCCACCAGGAAGCCATGCAATTTGAAAGTACTCAACATCATCTTGTATATAATGAGAGTCCTGCTTCTTGGACACCTGAATCAATTGGAGATAAGCACGATGCTTCAAGACTTGATCAGATGGTAATGTCTGGTGCGCCTTGTTTCCTTCCCAAACCAGGGAGCTGCAGCTCAACAAAACAGAAAACCGCTGACCGTCTACGCAGGCACCGTATTGCTGATAATCTGAAAGCCTTGCATGACTTGCTTCCAAATCGACCAGAGGGTAGCCAAGCTTATATACTGGACGACATCATTGACCATGTTAAATATTTGCAGCTTCATCTAAAGGAACTGAGTGTAAGTAGACTGCAAGCTGAATCAACTGATGTACCACTTGTTTTTCATGAGGGTTATGGCCATTATATTGATGACCAACAGACACTGAATGAACCCCTTGAGGAGATGATGGGGAAACTACTTGAAGAGCATCCAGGAGCAGCCACTCAGCTACTTGAGAGCAAGGGTCTTGTTGTGCTGCCTATGGATTTGGTTGAAGATTTGAGCCTAGCTGTTCAAATGTTTGGTGGTGGTGGTAGTGCCTTTGTTTGA 978 0.4254 MEGQSDQENPLQKMFFTSGGTISHASGSAVEDDDQSMQQDVVAERSGSQWTCLPKQSQNYVQYLTESSTYLPKTEVDMIGSNYAPIDETNKNLFYNDPGNGCGLKTSDHSSTEVDIGKQVGFWRINESEVHQEAMQFESTQHHLVYNESPASWTPESIGDKHDASRLDQMVMSGAPCFLPKPGSCSSTKQKTADRLRRHRIADNLKALHDLLPNRPEGSQAYILDDIIDHVKYLQLHLKELSVSRLQAESTDVPLVFHEGYGHYIDDQQTLNEPLEEMMGKLLEEHPGAATQLLESKGLVVLPMDLVEDLSLAVQMFGGGGSAFV* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1162 325 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 33 307 - -
Aev06g1162 325 Gene3D - 186 253 IPR036638 GO:0046983
Aev06g1162 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 190 247 IPR036638 GO:0046983
Aev06g1162 325 CDD bHLH_AtbHLH_like 193 242 IPR045239 -
Aev06g1162 325 Pfam Helix-loop-helix DNA-binding domain 190 235 IPR011598 GO:0046983
Aev06g1162 325 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 185 234 IPR011598 GO:0046983
Aev06g1162 325 MobiDBLite consensus disorder prediction 1 34 - -
Aev06g1162 325 PANTHER TRANSCRIPTION FACTOR BHLH66-LIKE ISOFORM X1 33 307 - -
Aev06g1162 325 SMART finulus 191 240 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1162 Aev-Chr6 7768468 7771621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1162 193 314 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 38.060 6.04e-22 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev06g1162 HLH 5.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1162 - - cam:101507064 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1162 06 7768468 7771621 Aev06g1162 06 7768468 7771621 ECH