Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1145 ATGGCCTCTACACGCGCGAAGCGGAAGCTTGAAGCGGCCTTCAATGGCAGCAACGACGCCGACCAGAGCAAGGTCCTCGTCACCGAAGACTCTCGCCTTCGTCATAACCAAGATCCCTCCGCTCAGATACTTCTGCAAATTGAGGTCCTCAATTCCACCGCAGCCACTGCCTCCGTGTCCGACCTTACCAATGCTATCAGAGCGCTTCTACTTCTCTCTCAATTCGCCAAGAAGGAAGATATGGTGGATAGAATGGTGGAGTGTGGTGCTATACCTGCTCTTATGAGGCTTTTGGAGGTGTCATCGGATGACGATGGTGCTTACGACCTTGGCAAGTATGAGTTGGAGAAAGCATGTGCCATGATTCTTGGGCTTCTTTCTGTCAAGCCAGAATATCAACAACTCATTGTTGATGCTGGAGCATTGCCATATCTTGTGCGTCTGCTAAGGAGGCACAAAACTAATAGCATTTCTCCAGTTCTTGTCGGTCTTCTTAGGAGAGCTGCTGATGCAATAACCAACCTTGCACATGAAAATACCAACATTAAAGCCCTAGTCAGGATGGAAGGTGGTATCCCTCCTCTGGTTGAATTGCTTGAATTCACTGATAAAAATGTACAGAAAGCAGCTGCGGGCGCTTTGCGAACTCTTGCATTTAAAAATGATGAAAATAAAGATCTGATTGTTGGGTGCCATGCGTTGCCCACTCTTGTATTTATGCTTCGATCAGAGGATCCTGCAATACATTATGAAGCGGTTGGTGTGATTGGGAATCTGGTTCACTCTTCGCCAGATATTAAGAAAGAAGTTCTTCAAGCTGGGGCCTTACAACCTGTCATTGAATTACTTAGTTCTAGCTGCGTAGAGAGTCAAAGAGAAGCAGCCCTTTTAATTGGTCAATTTGCTTCAACGGACACAGATTGCAAGATTCACATTGCCCAAAGAGGGGCTATTCCGCCACTAGTTCACATGCTCAAGTCTCCAGATGCACATCTTAAGGAAATGGCAGCTTTTGCTCTTGGGAGGTTGGCACAGGATTTACACAATCAAGCGGGAATTGTTTATCATGGGGGTATTGAACCTCTAATCAATCTTCTTGGCTCGAAGAATGGGCATGTCCAACACAATGCAGCCTTTACTCTCTATGGTCTTGCTGATAATGAGGACAATGTTGTAGATATTATTAAGGCTGGTGGTTTTCAAAAACTGCATGATGGAAGTTTCAAAGTTCAACAAACTAAAGAGTGTGTAGCAAGGACCTTAACGAGATTGCAGGAGAAGATGAATGGGCGAGTACTCAAACACTTGTTATACCTTATGCGCTTTGCGGAAAAGGGTGTTCAACGGCGTGTAGCTCTTGCTCTTGCTCATTTGTGTTCTGTTGATGATTGTAAAACTATATTCATTGACAATAACGGGTTAGAATTGCTGCTAGAACTTCTTGAGTCTACAAACCTTAAGCAGACAGGTGTTGCTTCACTGGCACTTCATCAGTTGGCTACCAGAGCCATTTCTGTTTCTCATGTTGATGTCGCTCCTCAATCACCAACTCCCCAGGTGTACTTAGGCGAGCAATATGTAAACAATCCTGAACATTCTGATGTCACATTCTTGGTTGAAGGAAAAAGGTTCTACGCTCATAGAATTTGTTTAGTTTCTTCTGATATATTCCGTGCAATGTTTGATGGTGGTTACAGGGAAAGGGAAGCCAAAGATATAGTGATTCCAAATATTAAATGGGATGTCTTTGAATCGATGATGAGATATATATACACTGGAACAGTAGATGTGAATTTGGATATTGCTCAGGATCTGCTCAAAGCTGCTGATCAGTATCTTCTAGAGGGTCTTAAGCGTCTTTGTGAATATGCCATTTCGCAGAATTATCCCAAAGCGACGAAGAGGAGTGTGAAGGAGAGCATCGTTGCAAGTGTTGCTTGCACCCCTTTCAACAGAGAGAGTTCAGTTATGGCGATGAGTGTTCAGGTATCAGGTTTGTGGTTGCCCAATTCTCCAGCAGCAACTCTAATATCTGATAGACTCTATTATCTTCCCAGCGGCGGCGGCGGCGGCGGAGGAGGAGGCAGGTTCTCCCCTTCAGCTCTCGCCGCCACTCCGAACAACCTCTCTTCCCAATCTTCCACCATTCAGATAGTTGGTGTGAAAGGCCATGGCTGGAGTGAAAATGGATATGCAAATCTCAACAGCAACACATTTGATGGTTGCCAAGGAGAGACAGATTATTGGACCGATCTTGACACTGATCTTTATCATTGGACTAAGCCATTACGCCCTGTGCAGTGGTTTCCTGGTCATATTGCAAAAGCAGAAAAAGAGCTAAAGGAGCAGCTCAGGCTGATGGATGTTGTGATAGAGGTGCGGGATGGCAGAATTCCTATGTCCACAAGTCATCCACAGATGGATTTATGGCTTGGTAATAGAAGGAGGATTCTGGTTTTAAATAGGGAAGACATGATATCAACTGCAGACCGCAATGCTTGGGCTGCTTATTTTACTAGGCAGGGCACAAAGGTTGTCTTTTCCAATGGGCAACTTGGAATGGGCACAATGAAGCTAGGGCGGTTAGCAAAGGAATTAGCAGCTGATGTAAATATTAGACGCAGAGCCAAAGGACTGCTTCCTCGTCCGGTTCGGGCTGGAATAGTGGGATACCCTAATGTTGGAAAATCATCTTTGATAAACCGTTTGTTAAAGAGGAGAATGTGTCCAGCAGCTCCTAGACCGGGAGTCACAAGAGAATTGAGGTGGGTTCGTTTTGGCAAAGATCTTGAACTGCTGGATTCTCCTGGGATACTCCCGATGCGAATCAGTGACCAGTCGGCGGCGATAAAACTGGCCATATGTGATGACATTGGAGAGAGGGCCTATGATGTGGCTGATGTTGCTGCAGTTCTAGTGCAGATGCTTACAAAGCTTCCTGCAGTAGGTGGAGATTCTCTTCGTAAACGCTACAAGATTGATGTAGATACCCAATGTGGTAAAACATTCGTAGATAAGCTTGCAGTCCAAGTATTCAATGGAAATGTTCAACAAGCAGCATTCCGAATTCTGTCAGATTTTAGGAAAGGCAAGTTTGGTTGGACTGCACTAGAGAGGCCTCCTAGGTGA 3129 0.4509 MASTRAKRKLEAAFNGSNDADQSKVLVTEDSRLRHNQDPSAQILLQIEVLNSTAATASVSDLTNAIRALLLLSQFAKKEDMVDRMVECGAIPALMRLLEVSSDDDGAYDLGKYELEKACAMILGLLSVKPEYQQLIVDAGALPYLVRLLRRHKTNSISPVLVGLLRRAADAITNLAHENTNIKALVRMEGGIPPLVELLEFTDKNVQKAAAGALRTLAFKNDENKDLIVGCHALPTLVFMLRSEDPAIHYEAVGVIGNLVHSSPDIKKEVLQAGALQPVIELLSSSCVESQREAALLIGQFASTDTDCKIHIAQRGAIPPLVHMLKSPDAHLKEMAAFALGRLAQDLHNQAGIVYHGGIEPLINLLGSKNGHVQHNAAFTLYGLADNEDNVVDIIKAGGFQKLHDGSFKVQQTKECVARTLTRLQEKMNGRVLKHLLYLMRFAEKGVQRRVALALAHLCSVDDCKTIFIDNNGLELLLELLESTNLKQTGVASLALHQLATRAISVSHVDVAPQSPTPQVYLGEQYVNNPEHSDVTFLVEGKRFYAHRICLVSSDIFRAMFDGGYREREAKDIVIPNIKWDVFESMMRYIYTGTVDVNLDIAQDLLKAADQYLLEGLKRLCEYAISQNYPKATKRSVKESIVASVACTPFNRESSVMAMSVQVSGLWLPNSPAATLISDRLYYLPSGGGGGGGGGRFSPSALAATPNNLSSQSSTIQIVGVKGHGWSENGYANLNSNTFDGCQGETDYWTDLDTDLYHWTKPLRPVQWFPGHIAKAEKELKEQLRLMDVVIEVRDGRIPMSTSHPQMDLWLGNRRRILVLNREDMISTADRNAWAAYFTRQGTKVVFSNGQLGMGTMKLGRLAKELAADVNIRRRAKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERAYDVADVAAVLVQMLTKLPAVGGDSLRKRYKIDVDTQCGKTFVDKLAVQVFNGNVQQAAFRILSDFRKGKFGWTALERPPR* 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1145 1042 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 357 399 IPR000225 GO:0005515
Aev06g1145 1042 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 PROTEIN 22 629 - -
Aev06g1145 1042 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 232 274 IPR000225 GO:0005515
Aev06g1145 1042 SUPERFAMILY ARM repeat 64 149 IPR016024 -
Aev06g1145 1042 Gene3D - 31 347 IPR011989 -
Aev06g1145 1042 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 772 975 IPR027417 -
Aev06g1145 1042 SMART BTB_4 533 629 IPR000210 GO:0005515
Aev06g1145 1042 SUPERFAMILY ARM repeat 166 500 IPR016024 -
Aev06g1145 1042 TIGRFAM GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 766 1038 IPR019991 -
Aev06g1145 1042 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 22 629 IPR044282 -
Aev06g1145 1042 Gene3D - 766 939 IPR027417 -
Aev06g1145 1042 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 316 358 IPR000225 GO:0005515
Aev06g1145 1042 CDD YlqF 768 939 - -
Aev06g1145 1042 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 89 141 IPR000225 GO:0005515
Aev06g1145 1042 SUPERFAMILY POZ domain 524 627 IPR011333 -
Aev06g1145 1042 Pfam Armadillo/beta-catenin-like repeat 263 297 IPR000225 GO:0005515
Aev06g1145 1042 Pfam Armadillo/beta-catenin-like repeat 306 344 IPR000225 GO:0005515
Aev06g1145 1042 Pfam Armadillo/beta-catenin-like repeat 183 218 IPR000225 GO:0005515
Aev06g1145 1042 Pfam Armadillo/beta-catenin-like repeat 221 260 IPR000225 GO:0005515
Aev06g1145 1042 Pfam BTB/POZ domain 526 628 IPR000210 GO:0005515
Aev06g1145 1042 Gene3D Potassium Channel Kv1.1; Chain A 513 647 IPR011333 -
Aev06g1145 1042 PRINTS GTP1/OBG GTP-binding protein family signature 886 906 IPR006073 GO:0005525
Aev06g1145 1042 PRINTS GTP1/OBG GTP-binding protein family signature 932 947 IPR006073 GO:0005525
Aev06g1145 1042 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 190 228 IPR000225 GO:0005515
Aev06g1145 1042 Gene3D - 944 1032 IPR023179 -
Aev06g1145 1042 Pfam 50S ribosome-binding GTPase 886 974 IPR006073 GO:0005525
Aev06g1145 1042 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 140 190 IPR000225 GO:0005515
Aev06g1145 1042 Gene3D - 348 430 IPR011989 -
Aev06g1145 1042 Gene3D - 431 509 IPR011989 -
Aev06g1145 1042 ProSiteProfiles BTB domain profile. 533 599 IPR000210 GO:0005515
Aev06g1145 1042 SMART arm_5 305 345 IPR000225 GO:0005515
Aev06g1145 1042 SMART arm_5 221 261 IPR000225 GO:0005515
Aev06g1145 1042 SMART arm_5 129 177 IPR000225 GO:0005515
Aev06g1145 1042 SMART arm_5 78 128 IPR000225 GO:0005515
Aev06g1145 1042 SMART arm_5 179 219 IPR000225 GO:0005515
Aev06g1145 1042 SMART arm_5 263 303 IPR000225 GO:0005515
Aev06g1145 1042 SMART arm_5 460 501 IPR000225 GO:0005515
Aev06g1145 1042 SMART arm_5 346 386 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1145 Aev-Chr6 7643141 7652155 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1145 276 503 U-box Gene Family AT2G23140 29.237 3.24e-17 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aev06g1145 MMR_HSR1 9.6e-15 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1145 - - sly:101256802 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1145 06 7643141 7652155 Aev06g1145 06 7643141 7652155 ECH