Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1127 ATGGCAGCGAACAACACCACCGCCGCTCCGCCGCGTCAGCTGTCTCAGAAGGAGGCTGACATCCAGATGATGCTTGCCGCCGAGGTTCATCTCGGCACCAAGAACTGCGATTTCCAGATGGAGCGCTACATCTTCAAGCGTCGCAATGATGGTATATACGTAATCAATCTTGGGAAGACATGGGAGAAGCTGCATCTGGCGGCACGGGTGATAGTGGCGATAGAAAACCCACAGGACATAATTGTGCAGTCAGCGAGGCCATACGGTCAGAGGGCGGTTCTGAAGTTCGCGCAGTACACTGGGGCCCATGCCATTGCCGGAAGGCACACTCCTGGCACGTTCACCAACCAGCTCCAGACTTCCTTCAGCGAGCCCCGCCTCCTTATTCTGACCGATCCCAGGACTGACCACCAGCCCATCAAGGAGGCTGCACTCGGCAACATCCCCACCATTGCCTTCTGTGACACCGACTCCCCCATGCGCTACGTTGACATCGGCATCCCTGCCAACAACAAGGGCAAGCACAGCATCGGCTGCCTCTTTTGGCTCCTTGCCCGCATGGTCTTGCAGATGCGCAACGTTATAACCCCTGGCCTAAAGTGGGATGTCATGGTGGATTTGTTCTTCTACAGAGAACCTGAGGAAACTAAGCAGGAGGAGGAGGATGAAGCACCAGTAGTCCAAGACTTTGCAATTTCAGAATACAATGCGACTGCTATTGGTGCCATTCCTGCTGATGGCCAGTGGTCTATTGATCAGCCGTGGCCTGATACAGCCCCGCAACCCATCGCTGCTGCTCCTGCCGCTACTGGTGTCAGCTGGGCTGCCGCCGAAGCTGGAGAATGGGAGGCTGTTCCACCTCCACAACAAATCCCAGCTCCCGGTGTTGATTCTGTCCAAGCTACTGGCTGGGAATGA 918 0.5599 MAANNTTAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYIFKRRNDGIYVINLGKTWEKLHLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRNVITPGLKWDVMVDLFFYREPEETKQEEEDEAPVVQDFAISEYNATAIGAIPADGQWSIDQPWPDTAPQPIAAAPAATGVSWAAAEAGEWEAVPPPQQIPAPGVDSVQATGWE* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1127 305 PRINTS Ribosomal protein S2 signature 142 153 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aev06g1127 305 PRINTS Ribosomal protein S2 signature 21 39 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aev06g1127 305 PRINTS Ribosomal protein S2 signature 51 60 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aev06g1127 305 PRINTS Ribosomal protein S2 signature 100 117 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aev06g1127 305 PRINTS Ribosomal protein S2 signature 125 142 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aev06g1127 305 PRINTS Ribosomal protein S2 signature 163 177 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aev06g1127 305 PANTHER 40S RIBOSOMAL PROTEIN SA 12 297 - -
Aev06g1127 305 SUPERFAMILY Ribosomal protein S2 16 206 IPR023591 -
Aev06g1127 305 CDD RPS2 24 190 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aev06g1127 305 Hamap 40S ribosomal protein SA [rps-0]. 8 285 IPR027498 GO:0003735|GO:0006412|GO:0015935
Aev06g1127 305 PANTHER 40S RIBOSOMAL PROTEIN SA 12 297 IPR005707 GO:0003735|GO:0006412|GO:0015935
Aev06g1127 305 TIGRFAM uS2_euk_arch: ribosomal protein uS2 16 212 IPR005707 GO:0003735|GO:0006412|GO:0015935
Aev06g1127 305 ProSitePatterns Ribosomal protein S2 signature 2. 125 149 IPR018130 GO:0003735|GO:0005840|GO:0006412
Aev06g1127 305 ProSitePatterns Ribosomal protein S2 signature 1. 21 32 IPR018130 GO:0003735|GO:0005840|GO:0006412
Aev06g1127 305 MobiDBLite consensus disorder prediction 279 305 - -
Aev06g1127 305 Gene3D - 20 225 - -
Aev06g1127 305 Pfam Ribosomal protein S2 123 188 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aev06g1127 305 Pfam Ribosomal protein S2 24 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aev06g1127 305 Pfam 40S ribosomal protein SA C-terminus 208 291 IPR032281 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1127 Aev-Chr6 7512354 7513684 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1127 1 305 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 70.227 2.64e-151 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1127 K02998 - gmx:100805318 491.5