Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1125 ATGTGTGGAGGTGCTATTATCTCCGACTTCATTCCGGCGGCCGTCGCGGGTAGGTCTCGCCGGCTAACCGCCGACTACCTCTGGCCGGACTTGAACAAGAACAGTTCAGGGAAGCTGTTCTCGAAGCCGGTGAGGAGTGAGGTGGTCGACCTCGACGATGATTTCGAGGCTGATTTCAGGGAATTCAAGGACGATTCCGACATAGACTACGACGATGAAGATGATGACTTGCTCGCCGATGTCAAGCCCTTTGCTTTCACCGCCAAGTCCTCCAAGCCCATGTCCCGTGCTGTAAAATCTGTGGCACTCAAAGGGCAAGCTGAGAAGTCTTCAAAGAGAAAGAGGAAGAATCAGTACAGGGGAATCCGTCAGCGTCCTTGGGGCAAATGGGCAGCCGAGATCCGTGATCCAAGAAAAGGGGTTCGTGTCTGGCTGGGAACCTTCAGCACTGCTGAAGAAGCTGCAAGAGCTTATGATGCTGAAGCTCGGAGGATTCGTGGCAAGAAAGCCAAGGTTAATTTCCCTGAGGAGGCTTCAGGTCCTTCCCCAAAACGCTCCAAAGCAAAACTGAACTCTGTTCAGCCCAATGTGAGCTGCAAGTTCAAGGGTGGTAACAATCAGGAGGAGAACCCTCTGGACGTGGTTGAACAGAAACCACTGGTTAGCCAGTATGCTAACATGGACTCCTTCGCTGACAATGGAAATGGGCTCACATCCCTTAACTCACCTGATGATGTGGCCCTTTACTTTAGTTCAGATCAGGGGAGCAATTCATTTGATTATTCAGATTTTGGGTGGGGTGAGCAGGCCCCAAAGAACCCCGAGATCTCATCCATGCTTTCTCCTTCTTTGGGAGGTGAATTTCTTTTTGTGCAAGATGCCAACCAGCAGCAAAACCTGCAGTCTAACTCTCAGGATATGGTACCTTTGCAAGATAACTCTGCAGCCAAGACACTGTCAGAGGAGCTTGTTGATATTGAGTCCAATTTGAAATTCTTTCAGATGCCTTTTATAGAAGAGAACTGGGATGATACTTCGTTGGAGTCCTTGCTAGGTGGAGTCACTACCCAGGATGGTGGAAATCTGATGAACCTCTGGACCTTTGATGACATTCCTTCCATGTCTTGA 1128 0.4965 MCGGAIISDFIPAAVAGRSRRLTADYLWPDLNKNSSGKLFSKPVRSEVVDLDDDFEADFREFKDDSDIDYDDEDDDLLADVKPFAFTAKSSKPMSRAVKSVALKGQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFSTAEEAARAYDAEARRIRGKKAKVNFPEEASGPSPKRSKAKLNSVQPNVSCKFKGGNNQEENPLDVVEQKPLVSQYANMDSFADNGNGLTSLNSPDDVALYFSSDQGSNSFDYSDFGWGEQAPKNPEISSMLSPSLGGEFLFVQDANQQQNLQSNSQDMVPLQDNSAAKTLSEELVDIESNLKFFQMPFIEENWDDTSLESLLGGVTTQDGGNLMNLWTFDDIPSMS* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1125 375 CDD AP2 118 176 IPR001471 GO:0003700|GO:0006355
Aev06g1125 375 PANTHER EREBP TRANSCRIPTION FACTOR 1 371 - -
Aev06g1125 375 MobiDBLite consensus disorder prediction 97 122 - -
Aev06g1125 375 SMART rav1_2 118 181 IPR001471 GO:0003700|GO:0006355
Aev06g1125 375 PANTHER DNA-BINDING DOMAIN 1 371 IPR044808 GO:0003700|GO:0009873
Aev06g1125 375 Gene3D AP2/ERF domain 117 176 IPR036955 GO:0003700|GO:0006355
Aev06g1125 375 Pfam AP2 domain 118 167 IPR001471 GO:0003700|GO:0006355
Aev06g1125 375 MobiDBLite consensus disorder prediction 172 191 - -
Aev06g1125 375 ProSiteProfiles AP2/ERF domain profile. 118 175 IPR001471 GO:0003700|GO:0006355
Aev06g1125 375 SUPERFAMILY DNA-binding domain 118 176 IPR016177 GO:0003677
Aev06g1125 375 PRINTS Ethylene responsive element binding protein signature 141 157 IPR001471 GO:0003700|GO:0006355
Aev06g1125 375 PRINTS Ethylene responsive element binding protein signature 119 130 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1125 Aev-Chr6 7494649 7496492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1125 1 374 AP2-EREBP Transcription Factor Family AT1G53910 47.436 3.76e-75 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev06g1125 AP2 4.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1125 K09286 - gmx:100170723 430.639