Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1119 ATGGATTCCAGCATAAACTCGTTCAAGGGATACGATAAGATAGCGGAGAAGCAAGCCTTCAAGAACAAGACACGCAAGCGCATCATCATCATCCTTCTCTCCTCCATTCTCCTCCTTGCCATCACCACCGCCGCCGCCCTCGGCACCCTCCTACCCAACCGCCATTCCTCCGCCACCTCTGCGCAGTCATCATCATCATCCTCACTGAAGGCGGTGTGCGACGTCACTCTGTACCCGAACTCGTGCCTGTCGAGCATCTCGTCACTCCCAAATTCGAACACCACAGATCCGCAGAAACTCTTCAGCCTCTCTCTCCAAGTCGCCATCAACGAGCTCTCCAAGCTCTCCCACTACCCTTCCACGCTCAGAGCCAAAGTCAAGGACCTCCGCCTTCAGAAGGCCATCGACGTCTGCGTAACCGTCCTCAACGACGCCGTCTCCAACCTCAACGACTCCATGTCTGCGCTCGGCGGTGGCGGAAACCACCTCCCGGCGACGAAGATCAGTGACATTGAGACGTGGCTGAGCGCCGCCATCACCAACCAGGGCACCTGCTTGGACGCCCTGGAGGAGATGAACTCCACCGCCGCAAATGCCATCCTGGAAGACATGAGAACCGCCATGAAGAACTCCACGGAGTTCTCGAGCAACAGCTTGGCCATCGTGACCAAGATCCTGAGGCTGCTGTCCAAGTTCAACAGCGACGCCCACCGCCGGAGGCTTCTCTGGTTCCCGGAGTGGGTGGGCCCTGCGGAGCGTAGACTGCTGCAGGAGGTGAACGCAACGGTGGCGGCGGACGTCGTAGTGGCGAAGGACGGGAGCGGGCAATACAGGACGATAAAGGAGGCGGTGGGAGCGGCGAAGAAGAGGAGCGAGAAGAGATTCGTGATATATGTGAAGGAAGGGACTTACGTGGAGAACATTGATTTGGATAAAGACACGTGGAACGTGATGATCTACGGCGATGGCAAGACCAAGACCATCATCTCCGGCAGCTGCAACGTCATCGACGGCACTCCCACTTTTCATACCGCCACTTTCGGTGTTTCGGGAAAGGGATTCATTGCGAAGGACATAGGGTTCGTGAACACTGCTGGTGCAGAGAAGCAGCAGGCGGTGGCGTTGCGATCTGGCTCGGATCGCTCTGTGCTCTTCAACTGCTCCTTTGAAGGCTTCCAGGACACACTCTACGCCCACTCCAACAGGCAGTTCTACCGCAACTGTGACATCGCCGGCACCATTGACTTCATATTCGGGAACGCTGCCGTCGTGCTCCAGAACTGTAGGATAATGCCGAGGCAGCCCCTGCCCAAGCAGTACAACACCATCACCGCTCAGGGCAGGAGCGACCCCAACCAGAACACTGCCATCGTCATCCACAAATCTTCGCTACTCCTCTTCTCTCCGCCCGACCCTAATGCCCATGCTGCTGCCACGTATCTAGGGCGGCCTTGGGGTGACCACGCAAGCACAGTGGTAATGCAATGTGAGATTGGGTCATTGTTGGACCCGGCCGGGTGGATTAGCTGGGACGGCGACCCTCCAAGCACCATATTCTATGGGGAGTACCACAACACCGGGCCTGGATCTGACGTGTCCCGACGGGTCAAATGGGCTGGGTATCATCCCGCTCTCTCAGACTCTGAGGCAGCCCACTACACAGTGCAGTCCTTTATTCAAGGCCCAGACTGGTTGCCGCCTTCTTTTGTACACTTTGACTCCGCCTTCTGA 1731 0.5731 MDSSINSFKGYDKIAEKQAFKNKTRKRIIIILLSSILLLAITTAAALGTLLPNRHSSATSAQSSSSSSLKAVCDVTLYPNSCLSSISSLPNSNTTDPQKLFSLSLQVAINELSKLSHYPSTLRAKVKDLRLQKAIDVCVTVLNDAVSNLNDSMSALGGGGNHLPATKISDIETWLSAAITNQGTCLDALEEMNSTAANAILEDMRTAMKNSTEFSSNSLAIVTKILRLLSKFNSDAHRRRLLWFPEWVGPAERRLLQEVNATVAADVVVAKDGSGQYRTIKEAVGAAKKRSEKRFVIYVKEGTYVENIDLDKDTWNVMIYGDGKTKTIISGSCNVIDGTPTFHTATFGVSGKGFIAKDIGFVNTAGAEKQQAVALRSGSDRSVLFNCSFEGFQDTLYAHSNRQFYRNCDIAGTIDFIFGNAAVVLQNCRIMPRQPLPKQYNTITAQGRSDPNQNTAIVIHKSSLLLFSPPDPNAHAAATYLGRPWGDHASTVVMQCEIGSLLDPAGWISWDGDPPSTIFYGEYHNTGPGSDVSRRVKWAGYHPALSDSEAAHYTVQSFIQGPDWLPPSFVHFDSAF* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1119 576 SUPERFAMILY Pectin lyase-like 262 572 IPR011050 -
Aev06g1119 576 ProSitePatterns Pectinesterase signature 2. 410 419 IPR033131 -
Aev06g1119 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 67 226 IPR035513 -
Aev06g1119 576 SMART PMEI_2 64 221 IPR006501 GO:0004857
Aev06g1119 576 Pfam Plant invertase/pectin methylesterase inhibitor 68 221 IPR006501 GO:0004857
Aev06g1119 576 ProSitePatterns Pectinesterase signature 1. 291 310 IPR018040 -
Aev06g1119 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 66 225 IPR035513 -
Aev06g1119 576 CDD PMEI-like_3 71 227 - -
Aev06g1119 576 PANTHER PECTINESTERASE 16 573 - -
Aev06g1119 576 Gene3D - 260 576 IPR012334 -
Aev06g1119 576 TIGRFAM PME_inhib: pectinesterase inhibitor domain 50 225 IPR006501 GO:0004857
Aev06g1119 576 Pfam Pectinesterase 266 561 IPR000070 GO:0030599|GO:0042545
Aev06g1119 576 PANTHER PECTINESTERASE 1-RELATED 16 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1119 Aev-Chr6 7461339 7463139 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1119 1 570 Carbohydrate Esterase AT1G53840 52.614 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1119 - - gmx:100777128 707.597