Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1118 ATGGATTCGATAAACTCCTTCAAGGGGTATGGCAAAGTAGACGAGGCGGAGCAGCAAGCCTTCAAGAACAAGACCCGCAAGCGCCTCATCATCGTCACTGTCTCCGCCATTGTGCTCCTCGCAGTCATCATCGCCGCCGTCGTCGGCGCCGTCGTTCACAACCGCCACTCCTCCGACTCCGACTCCGACAGCTCGGCCCCTTCAACGGAGCTGACGCCCGCATCGTCGCTGAAGGCGGTGTGCGACGTCACTCTGTACCCGAACTCGTGCCTGTCGAGCATCTCGTCACTCCCAAATTCAAATACCACAGATCCGCAGAAACTCTTCAGCCTCTCCCTCCAAGTCGCCATCAACGAGCTCTCCAAGCTCTCCCACTACCCTTCCACGCTCAAAGACAAAGTCAAGGACCCCCGCCTCCAGAAGGCCATCGACGTCTGCGCAACCGTCCTCAGCGACGCTGTCTCCAGCTTCAACGACTCCGTCTCGGAGTTCAGCGGCGGCGGCGGGAAGCTCCTCCCGTCGGCGAAGATCAGCAACATTGAGACGTGGCTGAGCGCCGCCATTACGAATCAAGACACCTGCTTGGACGCTCTTGAGGAGTTGAACTCCACCGCCGCCAATGCCATCCTGGAGGACATGAAAACCGCCATGAAGAACTCTACGGAGTTCTCGAGCAACAGCCTGGCCATCGTGACCAGGATCCTAGGGCTGTTGTCGAAGTTCAACAGCCCCGTCCACCGGCGGCTGCTTGGGTTCCCGGAGTGGGTGGGGCCGGAGGAGCGGAGGCTGCTGCAGGAGGTGAACGCAACGACGGGGACGCCAGACGCGGTGGTGGCAAAGGACGGGAGCGGACAGTACAAGACGATCAAGGAGGCGGTAGCGGCGGTGAAGAAGAAGAGCGAGAAGAGATTCACGATATATGTGAAGGCAGGGACTTATGTGGAGAACGTCGATTTGGACAAGAACACCTGGAATGTGATGATCTACGGCGATGGCAAGACCAAGACCATCATTTCCGGTAGCCGCAATTTCATCGACGGCACTCCCACTTTTGAAACCGCCACTTTCGCTGTCAAAGGAAAGGGATTCATTGCAAAGGACATAGGGTTCATGAACACTGCAGGTGCAGACAAGCACCAGGCTGTGGCCTTCAGATCAGGATCTGATCAGTCCGTGTTCTATAAGTGCTCCTTCGATGGCTTTCAGGACACTCTCTACGCCCATTCCAACAGGCAGTTCTACCGCGACTGCGACATAACCGGCACCATCGACTTCATATTCGGCAACGCAGCCGTCGTGTTCCAGAACTGCAAGATCATGCCAAGGCAGCCCCTGTCAAACCAGTTCAACACCATCACAGCTCAGGGCAAGAAGGACCCCAACCAGAACACCGGAATTGTGATCCAGAAATCATCGTTCTCGGCGCTCGACAACCTTCAGGCCCCCACGTACCTTGGCAGGCCTTGGAAGGACTACTCCACCACTGTCATCATGCAATCTGATATTGGCTCATTCTTGAAGCCAGTAGGGTGGATTAGCTGGATTGCCAACGTTGACCCTGTAAGCACCATATTCTATGCTGAATACAAGAACACCGGGCCTGGATCAGACGTGTCTCAACGGGTCAAATGGGCTGGGTACCATCCTGCTCTCTCAGAGAGTGACGCAGCCAAGTACACAGTGCAGTCCTTTATTGACGGCCCAGACTGGTTGCCAAATACTGCTGTACAGTTTGACTCCACATTGTGA 1749 0.5592 MDSINSFKGYGKVDEAEQQAFKNKTRKRLIIVTVSAIVLLAVIIAAVVGAVVHNRHSSDSDSDSSAPSTELTPASSLKAVCDVTLYPNSCLSSISSLPNSNTTDPQKLFSLSLQVAINELSKLSHYPSTLKDKVKDPRLQKAIDVCATVLSDAVSSFNDSVSEFSGGGGKLLPSAKISNIETWLSAAITNQDTCLDALEELNSTAANAILEDMKTAMKNSTEFSSNSLAIVTRILGLLSKFNSPVHRRLLGFPEWVGPEERRLLQEVNATTGTPDAVVAKDGSGQYKTIKEAVAAVKKKSEKRFTIYVKAGTYVENVDLDKNTWNVMIYGDGKTKTIISGSRNFIDGTPTFETATFAVKGKGFIAKDIGFMNTAGADKHQAVAFRSGSDQSVFYKCSFDGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQNCKIMPRQPLSNQFNTITAQGKKDPNQNTGIVIQKSSFSALDNLQAPTYLGRPWKDYSTTVIMQSDIGSFLKPVGWISWIANVDPVSTIFYAEYKNTGPGSDVSQRVKWAGYHPALSESDAAKYTVQSFIDGPDWLPNTAVQFDSTL* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1118 582 CDD PMEI-like_3 79 234 - -
Aev06g1118 582 PANTHER PECTINESTERASE 8 579 - -
Aev06g1118 582 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 235 IPR035513 -
Aev06g1118 582 TIGRFAM PME_inhib: pectinesterase inhibitor domain 65 232 IPR006501 GO:0004857
Aev06g1118 582 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 235 IPR035513 -
Aev06g1118 582 SUPERFAMILY Pectin lyase-like 273 580 IPR011050 -
Aev06g1118 582 Pfam Plant invertase/pectin methylesterase inhibitor 76 230 IPR006501 GO:0004857
Aev06g1118 582 PANTHER PECTINESTERASE 1-RELATED 8 579 - -
Aev06g1118 582 ProSitePatterns Pectinesterase signature 2. 419 428 IPR033131 -
Aev06g1118 582 SMART PMEI_2 72 230 IPR006501 GO:0004857
Aev06g1118 582 Gene3D - 269 582 IPR012334 -
Aev06g1118 582 ProSitePatterns Pectinesterase signature 1. 300 319 IPR018040 -
Aev06g1118 582 Pfam Pectinesterase 275 567 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1118 Aev-Chr6 7455677 7459043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1118 1 576 Carbohydrate Esterase AT1G53840 60.135 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1118 - - gmx:100777128 838.18