Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1117 ATGAAGAAGCTCCAACAAGATGGGTTCTTCTTGGCCAGAATCTCTGATTCCATGTCCAACAAGAAGAAGAAGAAGCTCTTGCTGGCTGTGTTGGGTATGTTCCTGGTGGTGGCCATCGTGGCAGGAGTAACTACCTCTCATCATCATCATCATCATCATCATCATGAATCGTCCTCCTCCCCTGCACATTCCATCATCAAGAGCGCATGCAGCAGCACATTGTACCCTGACTTGTGCCTCTCATCCATATCCTCTCATCCTGCAGCCCTCACTCAGAACGTTTCAACCCACAAAGATGTCATAATGCTGGTCTTGAACATTACCACCGGAATTGTAGAGCACAACTACTTCACCATAGAGAAGCTGATAAGCAACAAAAAGGGCCTCAACCTCACCAAGAGGGAGAAATGCGCCCTCCATGACTGCCTGGAAACCATTGCGGAGACACTCTACGATCTCAGAAAGGCCAAGGATGATCTCAGAGACTACCCCAACGGCGGCGGCAAGTCATTGTATCAGCACGCCGAAGACCTCAAGACAGTGATAAGCTCAGCAATAACGTACCAAGAGACTTGCTTGGATGGGTTCTCCCACTCGGAGGCAGAGAAGCGCTTCAGGAAGTATCTGGAAGCAGGGCAGGTGCACGTGGAGCACTTGTGCAGCAATGCCTTGGCTATGACAAAGAACCTCACTGACTCTGACATTGCCAATTACGAGAGCAATAACAAGAAGAGGAACAAGCTGCTGATGGAGGAGAGCAGGGGTGATGGGATTAAATGGCCTGAGTGGATTTCTGGGCCCGACAGGCGGCGGCTGCTGCAGTCGCCTTCGCAGGGGGCGGCGGACGTGGTGGTAGCGGCAGATGGTAGTGGGGACTTCAGGACGGTGTCGGCGGCGGTGGCAGCAGCTCCGGAGAGGAGTAGCAGGAGATATGTGATCAGGATAAAGGCAGGAGTGTACAGTGAGAATGTGGAAGTGCCACGTAGCAAGACTAATATCATGTTCTTGGGTGATGGAAGTACCAACACTTTCATTAGAGCAAGTAGAAATGTTGTTGATGGCAGCACAACCTTCAACTCTGCCACTGTTGCAATAGTGGGTGACGGATTCTTGGCGAGAGGGATATCGTTCCAGAACACAGCAGGGGCATCAAAGCACCAAGCAGTGGCGGTTCGAGTGGGATCAGATCTAGCAGCATTCTACCAGTGCGGCTTCGAGGCATTCCAAGACACCCTCTACGTCCACTCCAACCGCCAGTTCTTCGCCAAGTGCTTCATCGCCGGCACCGTCGACTTCATCTTCGGCAACTCCGCCGCCCTCTTCCAGGACTGCGACATCCACGCCAGGCGCCCCAACGCTGGGCAGAAGAACATGGTCACCGCACAAGGCCGCGTGGACCCCTACCAGAACACCGGCATCGTCATCCAGAAGAGCAGGATCGGCGCCACCGCCGACCTGCAGGCCGTGAAGGGCAGCTTCCCGACGTACCTTGGGAGGCCATGGAAGGAGTACTCTCGGACTGTGGTGATGCAGTCCGCCATCAGCGATGTGATTCAGGCAGCTGGGTGGTTCGAGTGGGATGGCAACTTCGCCTTGAACACGCTCTTCTATGGCGAGTATAGCAACACCGGGCCTGGCGCTGACACCTCGCGCAGGGTTAGCTGGAAGGGCTTTAGGGTGATTAGCAGTGCGTCTGAGGCCCAGGCTTTTACTGCCGCCAACTTCATTGCAGGTTCTGCCTGGTTGGGCTCCACCGGATTCCCTTTCTCTCCCGGCCTCTAG 1782 0.546 MKKLQQDGFFLARISDSMSNKKKKKLLLAVLGMFLVVAIVAGVTTSHHHHHHHHHESSSSPAHSIIKSACSSTLYPDLCLSSISSHPAALTQNVSTHKDVIMLVLNITTGIVEHNYFTIEKLISNKKGLNLTKREKCALHDCLETIAETLYDLRKAKDDLRDYPNGGGKSLYQHAEDLKTVISSAITYQETCLDGFSHSEAEKRFRKYLEAGQVHVEHLCSNALAMTKNLTDSDIANYESNNKKRNKLLMEESRGDGIKWPEWISGPDRRRLLQSPSQGAADVVVAADGSGDFRTVSAAVAAAPERSSRRYVIRIKAGVYSENVEVPRSKTNIMFLGDGSTNTFIRASRNVVDGSTTFNSATVAIVGDGFLARGISFQNTAGASKHQAVAVRVGSDLAAFYQCGFEAFQDTLYVHSNRQFFAKCFIAGTVDFIFGNSAALFQDCDIHARRPNAGQKNMVTAQGRVDPYQNTGIVIQKSRIGATADLQAVKGSFPTYLGRPWKEYSRTVVMQSAISDVIQAAGWFEWDGNFALNTLFYGEYSNTGPGADTSRRVSWKGFRVISSASEAQAFTAANFIAGSAWLGSTGFPFSPGL* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1117 593 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 231 IPR035513 -
Aev06g1117 593 CDD PMEI-like_3 68 231 - -
Aev06g1117 593 SUPERFAMILY Pectin lyase-like 279 592 IPR011050 -
Aev06g1117 593 ProSitePatterns Pectinesterase signature 2. 426 435 IPR033131 -
Aev06g1117 593 Gene3D Invertase/pectin methylesterase inhibitor family protein 62 232 IPR035513 -
Aev06g1117 593 Gene3D - 277 593 IPR012334 -
Aev06g1117 593 Pfam Plant invertase/pectin methylesterase inhibitor 65 226 IPR006501 GO:0004857
Aev06g1117 593 PANTHER PECTINESTERASE 21 591 - -
Aev06g1117 593 Pfam Pectinesterase 282 578 IPR000070 GO:0030599|GO:0042545
Aev06g1117 593 SMART PMEI_2 61 226 IPR006501 GO:0004857
Aev06g1117 593 PANTHER PECTINESTERASE 21 591 - -
Aev06g1117 593 TIGRFAM PME_inhib: pectinesterase inhibitor domain 53 231 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1117 Aev-Chr6 7448386 7451059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1117 21 593 Carbohydrate Esterase AT3G14310 62.925 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1117 K01051 - pvu:PHAVU_010G123100g 756.903