Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1113 ATGGGTGACTCGTCCGAGTCAAGTGACAAGTTGGGTGAGTCTCCAGCGGTCGAGTTAACCGGCAAGATCATGGTGGTGGCCATAGTCGTGTTGTTCATGGTAGTTGTGTTTGTTCTGTTCCTCCATCTCTACGTCAAGTGGTTCTCGTGGCGCATGGAAGATAGCACCGCCCCACAACATAGGCGCCGCCGCCGCCGCCGCTTTGTGTTTTCCCCTGGCCAAGACCCCGCCAACTATGGCGCTCTCCGACGGGGCCTTGAGCCTTCTGTACTTAGGTCCCTGCCTGTGTTGGTGTTCCAACCCAAAGATTTCAAGGACGGTTTGGAGTGTGCAGTTTGCCTCTCTGAGGTCGTCGAAGGAGAAAAGGCCAGGCTTTTGCCCAAATGCAATCATGGGTTTCATGTAGATTGCATTGATATGTGGTTCCAATCCCATTCTACTTGCCCTCTTTGCAGGAACCCCGTAACTTCGAATTGTGAACAAAATAATGCCTCAGTGAACAATGAATCATCAGAAGCAGAAAATTCAGCTGATAGGGGAGGCTCAGAATCCCCTGTTTTCCCCACAAATGTATTCATTTGGGGGAACCAGACACAAGTTAGTTCTAATGATGCTTCTTTGGAAGAAAGTACTTCTCAGCCAGCATTATCCTCGTCCTCCTCAGCAGCTACTGCTAGTACTAGTGGCAACAATCATAATAGACTTAATGGAACTTTGGTGATTGATATACCAAGTGAGATCACTTCATCTTCTGTATTGCCTTCTGCAAGCAGGTTTGCTGAAGATGATTTGAAATCGCCAATTGCTGCCAGATTGAGGTCATTGAAGAGGCTTTTGAGCAGGGAAAAGAGGTTGAATCCTTGCAGTCCAAGTTCTATAGATGTGGAACAGGCAGTGGGAGGACAGAGCTAG 912 0.4836 MGDSSESSDKLGESPAVELTGKIMVVAIVVLFMVVVFVLFLHLYVKWFSWRMEDSTAPQHRRRRRRRFVFSPGQDPANYGALRRGLEPSVLRSLPVLVFQPKDFKDGLECAVCLSEVVEGEKARLLPKCNHGFHVDCIDMWFQSHSTCPLCRNPVTSNCEQNNASVNNESSEAENSADRGGSESPVFPTNVFIWGNQTQVSSNDASLEESTSQPALSSSSSAATASTSGNNHNRLNGTLVIDIPSEITSSSVLPSASRFAEDDLKSPIAARLRSLKRLLSREKRLNPCSPSSIDVEQAVGGQS* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1113 303 MobiDBLite consensus disorder prediction 203 235 - -
Aev06g1113 303 CDD RING-H2_EL5_like 109 152 - -
Aev06g1113 303 MobiDBLite consensus disorder prediction 162 178 - -
Aev06g1113 303 ProSiteProfiles Zinc finger RING-type profile. 110 152 IPR001841 -
Aev06g1113 303 PANTHER RING-H2 FINGER PROTEIN ATL3 3 296 - -
Aev06g1113 303 Pfam Ring finger domain 109 152 IPR001841 -
Aev06g1113 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 158 IPR013083 -
Aev06g1113 303 SMART ring_2 110 151 IPR001841 -
Aev06g1113 303 MobiDBLite consensus disorder prediction 162 182 - -
Aev06g1113 303 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 3 296 IPR044675 -
Aev06g1113 303 SUPERFAMILY RING/U-box 90 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1113 Aev-Chr6 7432600 7433511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1113 18 286 C3H Transcription Factor Family AT1G53820 41.414 2.00e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1113 - - adu:107491762 344.354