LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev06g1101	ATGAGCTCTCCCTCTCCCAACCTTTCTCACCACCACACTACATGCCATGACAGAGCTTGGAGATGGGTCTCATCACCACCACCACACCTTTGGACTCCATCAAGCTCTCTCTCTTTTCACCACCACGCCATGGCTAAGCTTGGAGAAGGGTTGCGCATTTGTTTGTGGAGGAAAGATGGACTTGCAACTTGGACTGCTTCATTGCTCTTACTGGTGCGAAGTGATGCTAGTGTGGTGATGGAAGAGAGAGAGAGAGGTGGGAGGGATGAAAGTGGTGGCATGATATTCATGAATGACCCAATGTGTGGCGAGACCACTGTGAGCACGACCTTTGTGAAAGACCAACGTCTTCTTGGTGCCGATGACGGCATTCCCCTTTGTGATGTTACGGTCTCTGCCTGTGGCTTTCCAGTAGCCACTCTTGGTCGTCCTGTTGGTTCTGCTGCTGCTGTTTGGATACTTGCAGTCCCTAGGGCTAAAGAAGTACCATTCTGGGTCTTCCGATTTTATCACGGACAGTGCTGTATGTTGTTATTTGTATATTTAACTGTGGATTCTTTTGATTGTTCTTTTGGACTTTTGCAGGAACATATGTTGTTTGTTGATAACAGTTCCCAGAAGAATGGATCAGCCTTGGGAAACACAAAAGCTTCATTCCTTAGTGGGAGGAAGTTGAAGATGAACAAGTACACAGCACCAGTGAGAGGAGGATCGATCACCACAGTGTGTGCAGCAGCTGACCCTGACAGACCTCTGTGGTTCCCAGGCAGCACCCCTCCTCCATGGCTTGATGGCAGTCTCCCTGGTGACTTTGGCTTTGATCCTCTTGGTCTTGGATCTGATCCAGAGAGCCTGAGATGGAATGTTCAGGCAGAGCTTGTGCACTGCAGGTGGGCAATGTTGGGAGCTGCTGGCATCTTCATTCCAGAATTCCTAACAAAGATAGGGATATTGAACACCCCATCATGGTACACAGCTGGAGAACAGGAATACTTCACAGACACAACCACACTCTTCATTATTGAGCTCATCTTCATTGGCTGGGCTGAGGGTAGGAGATGGGCTGATATCCTCAAGCCTGGGTGTGTCAACACTGACCCCATCTTCCCAAACAACAAGCTCACCGGCACCGATGTTGGTTACCCAGGTGGGCTCTGGTTTGACCCACTTGGGTGGGGATCTGGTTCTCCTGAGAAGATCAAGGAGTTGAGAACCAAGGAGATCAAGAATGGGAGACTGGCCATGCTGGCTGTGATGGGTGCATGGTTCCAGCACATATACACTGGCACTGGCCCTATTGACAACCTCTTTGCCCACCTTGCAGATCCTGGTCATGCTACCATTTTTGCTGCTTTCACCCCCAAGTGA	1368	0.4978	MSSPSPNLSHHHTTCHDRAWRWVSSPPPHLWTPSSSLSFHHHAMAKLGEGLRICLWRKDGLATWTASLLLLVRSDASVVMEERERGGRDESGGMIFMNDPMCGETTVSTTFVKDQRLLGADDGIPLCDVTVSACGFPVATLGRPVGSAAAVWILAVPRAKEVPFWVFRFYHGQCCMLLFVYLTVDSFDCSFGLLQEHMLFVDNSSQKNGSALGNTKASFLSGRKLKMNKYTAPVRGGSITTVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIIELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK*	456

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev06g1101	455	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	215	455	IPR001344	GO:0009765\|GO:0016020
	Aev06g1101	455	Gene3D	Chlorophyll a/b binding protein domain	260	445	-	-
	Aev06g1101	455	PANTHER	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	215	455	-	-
	Aev06g1101	455	Pfam	Chlorophyll A-B binding protein	259	425	IPR022796	-
	Aev06g1101	455	SUPERFAMILY	Chlorophyll a-b binding protein	246	453	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev06g1101	Aev-Chr6	7355750	7364044	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev06g1101	243	455	Chloroplast and Mitochondria Gene Families	AT3G61470	92.019	1.34e-146	417

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev06g1101	K08908		-	gmx:100784089	500.745