Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1098 ATGATGGAGGAAGAAGTGAAAGGGTATTCTGACAGCAGAGAAGAGGAGGAGGAAGAGGAAGCAGGTGAGATCATTGCAATCGCAGCAAGAGAACAAGAAGAAAGCAACAACAGGTTACAGTTACACCAGCAAGATGCAGCAGCTCCCAATTTCATGAGGAATCAGCAGCAGCTGGAGTTCATGGACTTGTCACTGGGGAGCAGCAGCAGCAACAACAAGGAAGAAGAAGCCAATTTGCAGCAAGGATCTAGCAGCAGCCATCACCATGGGGGCTCTGAGGCGGCAGTAGAGAAAGAGCACATGTTCGACAAAGTGGTGACGCCGAGCGACGTGGGGAAGCTGAACCGGCTGGTGATACCGAAGCAGCACGCGGAGAAGTACTTCCCTCTGGACTCGTCGTCGAACGAGAAGGGGCTTCTGCTGAACTTCGAGGACAGGAACGGGAAACTGTGGCGGTTCAGGTACTCGTACTGGAACAGCAGCCAGAGCTACGTGATGACCAAAGGGTGGAGCCGTTTCGTGAAGGAGAAGAAGCTGGATGCCGGCGACATTGTGTCCTTCCAGCGTGGCCTTGGGGACATGTTCCGCCACAGGCTCTACATTGACTGGAGGAGGAGGCCTGATCATCCCTCCACCGCTGATCATCATCATTACCATCATCAGTACCCCTCTTCTGCAGCTGCTGCCTCCTCCCTCATCACGCCTTTGTTCCTTCCCAATCACTACTCCTTCAGATGGGGCGCTGGAAGGTTCTACTCTCTGCCTTCCCCTTCTTCTTCTTCTCCTTCTTCTGCACACTCCAATCTGCCTCCTCTTCCTCGCCACCATCTTCACGACCATCATCAGCAGCAGCAACTCAATTACAACCATATCGGCAGTGGCTATGGTGGTGGTGGTGACATGATGAATTCGGGATCTGGTGGTGGTGGTGGTGGGTCGCTCTATTACCTGAGGTCAACCCCGTCAATGTCAATGGTTGACCAACAAAACTTGACGGGGCAGCAGCAAGAGATCAGAGGAGGGGCTGTTGCCCCTATGATCATTGATTCTGTGCCGGTTGCCCATCATCACCACAGGAGCGGAGGAGGAGGAGGAGGAGTAGTGGATGTGGATGCTAGTAATAGTAATAGTACTAGTGCGGGAAAACGGTTGAGGCTATTTGGGGTAAACATGGAGTGCTCTTCTAATTCAGCGGCGGAGGACCCTAATTCTTCATCAGCTCCCTCTTCTTCCTCTCTGCAGCGTTCATCTTCGGCAAGCATTGTTGGGTTGATGTCGTTCACAACAACACTGCTGCTGGCTGCTGCTGCTACTCCTGCTGGCTTAGTTAGGCATTTTAGCTTTGCAGAAGATAAAAGAGCTGAAACGGTTTCATTGTACAGCTGTAAAAAGCATGCAGCCGCCTTCTTGTCTGGATCGGCACTGTTCACAAACGTTCCTCATCACCACAGTCCTCTTACTGTTGATGACTCCCTGCCTTTTTAA 1485 0.5205 MMEEEVKGYSDSREEEEEEEAGEIIAIAAREQEESNNRLQLHQQDAAAPNFMRNQQQLEFMDLSLGSSSSNNKEEEANLQQGSSSSHHHGGSEAAVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGLGDMFRHRLYIDWRRRPDHPSTADHHHYHHQYPSSAAAASSLITPLFLPNHYSFRWGAGRFYSLPSPSSSSPSSAHSNLPPLPRHHLHDHHQQQQLNYNHIGSGYGGGGDMMNSGSGGGGGGSLYYLRSTPSMSMVDQQNLTGQQQEIRGGAVAPMIIDSVPVAHHHHRSGGGGGGVVDVDASNSNSTSAGKRLRLFGVNMECSSNSAAEDPNSSSAPSSSSLQRSSSASIVGLMSFTTTLLLAAAATPAGLVRHFSFAEDKRAETVSLYSCKKHAAAFLSGSALFTNVPHHHSPLTVDDSLPF* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1098 494 ProSiteProfiles B3 DNA-binding domain profile. 102 207 IPR003340 GO:0003677
Aev06g1098 494 Pfam B3 DNA binding domain 102 206 IPR003340 GO:0003677
Aev06g1098 494 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 48 416 - -
Aev06g1098 494 Gene3D - 95 220 IPR015300 -
Aev06g1098 494 SUPERFAMILY DNA-binding pseudobarrel domain 99 206 IPR015300 -
Aev06g1098 494 MobiDBLite consensus disorder prediction 1 24 - -
Aev06g1098 494 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 48 416 IPR044800 GO:0003700
Aev06g1098 494 SMART B3_2 102 207 IPR003340 GO:0003677
Aev06g1098 494 MobiDBLite consensus disorder prediction 65 90 - -
Aev06g1098 494 MobiDBLite consensus disorder prediction 65 95 - -
Aev06g1098 494 CDD B3_DNA 100 189 IPR003340 GO:0003677
Aev06g1098 494 MobiDBLite consensus disorder prediction 354 381 - -
Aev06g1098 494 MobiDBLite consensus disorder prediction 257 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1098 Aev-Chr6 7333044 7336297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1098 62 393 RAV Transcription Factor Family AT2G46870 48.503 2.56e-78 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev06g1098 B3 2.6e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1098 - - lja:Lj3g3v2520080.1 340.502