Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1097 ATGGAGGGTGGAAATAGGGTTCCGGGGTCAGCAGGTGAGGGTGACCCCTCATACTGGCTGGACGCGTGTGAGGACATATCATGCGATTTCATCGATTTTGATGTGTCATCAGTGGCGTCAGAGCAGCCGGATAACACTTCCAACCAGGACTTCTTTGGTGGGATTGAACGAATCCTGGATAGCATCAAGAATGGTGGTGGCCTCCCTCTTGATGCAGAGCCCAATTCCAATGCCAGTGGTGAACCAGCACCATGGCTGCCTCATGATGCCCCTTCTTCTGCGATCTCCAAGGTGCAGGCTTTGGCCCCACTTGCTGGCTCCAATGGTACTGTGGAAGATGGTTTTGTGAAGAGTGAATTGGTTGTGGAGAAAAATGGCCGTGCTGGTGATGCTCTTAAGCGTTCAGGAGCTGAAAGTAATGGCTGTAGTAAGCTTTCAAATGGTAATGATGGTCAGATTTTGGTTAATTGTTCTGAGGAAAGTGGAGGTGTGAATAGAGGGCGTGAGCTGTTGAGGGAATATGATGTTGATGGTGAAGAGAGATGCGGCAAAAGGGCAAGGCTTGGCAACTATAAGAATGAGAGGCATTATTCTGGTAGAGTGAATTATCAACTTAAGGAGAGAGAGAGGTGTTTCAGTAATAGGAAGAGGCCACGGGATAGGGATGAAATTGATCTTAAGAGGGATAAAGATTGTGTCAGGAAAAGAGAAAATTACGGTACTTGTGGCAGGAGAGATGCTAGAGATAGGGATTGGAGGGATAGAGAACCCAGGGGTTACTGGGAGAGGGATAAATCGGGTTCCAATGATATGGTTTTTCGCTTGGGCACTTGGGAAGCTGATCGGGATCGAGAAGAGAAAATGACGAATGACACAAAACAGGAAAGCAATGGAAAGCTTGAGAAGGCATCTGAGGAGGCTAAGGAGAGGGCTCCTGAGGAAAAAGCTAGACAGTATCAATTGGATGTTCTTGACCAGGCAAAGAAGAAAAATACTATAGCTTTTCTCGAAACTGGAGCAGGGAAGACACTTATTGCTGTTCTTCTCATCAAAAGTATACAGGAGAGTTTGCAAAAGCAAAATAAGAAAATGCTTGCAGTATTCTTAGTTCCAAAAGTTCCACTTGTGTACCAGCAAGCTGAAGTAATTCGTGAGCGGACTGGTTATCAAGTAGGCCACTATTGCGGAGAAATGGGGCAGGATTTTTGGGATGCTCGAAGGTGGCAGCGTGAATTTGACACTAAACATGTCTTAGTCATGACTGCTCAAATTCTTTTGAACATTTTGAGACATAGTATAATTAAAATGGAAGCAATCAATCTCCTGATTCTGGATGAGTGCCATCATGCTGTCAAGAAACATCCATATTCACTGGTCATGTCTGAGTTCTACCATACAACTCCCAAAGAGAAGAGACCATCTGTATTTGGAATGACTGCCTCTCCTGTTAACTTGAAGGGTGTCTCCAGCCAAGTAGATTGTGCAATTAAAATTCGTAATCTTGAAAGTAAGCTAGATTCAATAGTTTGTACCATTAAAGATCGCAAGGAGCTGGAGAAACATGTGCCAATGCCTTCGGAAGTTGTGGTGGAGTATGATAAAGCAGCTAGTTTGTATTATCTACATGAACAAATAAAGCAAATGGAGGTTGAAGTTGAAGAAGCTGCAAAATCGAGTTCAAGAAGAAGCAAATGGCAGTTTATGGGAGCTAGAGATGCTGGAGCAAAGGAAGAGCTGCGCCAAGTATATGGTGTTTCTGAAAGAACAGAAAGCGATGGAGCTGCAAACCTAATTCAGAAGTTGAGAGCTGTCAATTATGCACTTGGTGAACTGGGGCAGTGGTGTGCATATAAGGTTGCACAATCTTTTCTGGCAGCTTTGCAAAATGATGAGAGGGCAAACTACCAACTTGATGTCAAGTTTCAGGAATCATATCTGAGCAAAGTTGTCTCTCTTCTGAAATGTCAACTGTCAGAGGGTGCAGCTTCTGACAAAAATGCTGCAGTCGATGACTCAAAGCACGGGGGAGCTCAAAGTGGGTCTGAACCTGAAGAAATTGAGGAAGGAGAGCTTCCAGACAGTCATGTTGTCTCTGGCGGAGAGCATGTGGATGTCATAATAGGAGCTGCCGTGGCTGATGGAAAGGTGACCCCCAAGGTGCAGGCACTGATAAAAATTCTTCTAAAGTATCAGCACACAGAAGACTTCCGTGCAATCATCTTTGTTGAGCGCGTTGTATCTGCATTAGTTCTACCGAAGGTTTTTGCAGAGCTGCCATCTCTTAGCTTCGTGAAGTGTGCAAGCTTGATTGGACACAACAATAGTCAGGAAATGCGAACTTACCAAATGCAGGATACAATTGCTAAGTTCCGTGATGGGCGGGTCACATTGTTAGTTGCTACGAGTGTTGCTGAAGAAGGACTTGATATCCGGCAATGCAATGTTGTTATTCGCTTTGACCTTGCAAAGACTGTTCTTGCATACATTCAGTCTAGGGGTCGTGCTAGAAAGCCTGGGTCTGATTACATCCTGATGGTTGAGAGGGGGAACTTGTCACATGAAGCATTCCTCCGGAACGCCAGAAATAGTGAGGAGACCCTGCGCAAAGAAGCGATTGAGAGAACAGACCTTAGTCATCTAAAAGACACTTCGAGATTGATTTCAGTAGATACCCGGCCTGGAATGGTATATCAAGTGGAGTCAACCGGTGCAGTTGTGAGCTTAAATTCTTCTGTTGGTCTTATCCATTTCTACTGCTCTCAGCTTCCAAGTGATAGATATTCAATTCTTCGTCCTGAGTTTATTATGGAGAAACATGAAAAACCAGGAGGTCCCATTGAATATTCTTGCAAGCTTCAACTGCCTTGTAATGCACCGTTTGAAAATCTTGAGGGTCCTATCTGCGTTTCAATGCGCCTGGCACAACAGGCTGTTTGTCTGTCTGCTTGCAAGAAACTGCATGAGATGGGAGCATTCACTGACATGCTGTTGCCTGATAAAGGAAGTGGGGGAGAAAGTGAAAAGTCTGAGCAAAATGATGAAGGAGATCCACTTCCGGGAACTGCTAGACATAGGGAGTTTTATCCTGAAGGGGTGGCTGACATACTGAAGGGAGAATGGATCTTATCTGGAAAGGATGATTGCAACAACTCCAAATTGTTTCATCTTTATATGTATGCTGTGAAGTGCGAAAATGTAGGCAATTCAAAGGATCCATTCTTGACTCAAGTTTCAGATTTTGCAGTACTTTTTGGCAATGAGCTGGATGCAGAGGTGTTATCGATGTCAATGGATCTATTTATCGCTCGAACTGTGACTACAAAGGCATCTCTTGTCTTTAGTGGGTTGATAGATATCAATGAAAATCAGTTGGCATCCCTAAAAAGCTTTCATGTGAGATTAATGAGCATTGTCTTGGATGTGGATGTTGAACCGTCTACCACTCCTTGGGATCCTGCAAAAGCATATTTGTTTGTCCCAATGGTTAGCGATAAGTCTGTAGATCCTATGAACCAAATTGATTGGCATCTGGTTGAGACAATAATTGGAGCAGAAGCATGGAAAAATCCCCTCCAGAGGGCTCGACCAGATGTTTACCTTGGCACTAATGAGAGAACATTAGGTGGAGATAGAAGGGAATATGGATTTGGGAAATTGCGTCATGGCATGGCTTTTGGGCAAAAAGCACATCCAACTTATGGAATCAGAGGAGCTGTGGCCCAGTTTGATGTGGTAAAAGCTTCAGGATTGGTTCCTAACAGAGATGCCTTGCCAACGCAAAGAAATATCAATTTGACTGCCAAAGCAAAATTGATGATGGCAGATACCTGTACCAATGCAGAGGATCTTGTCGGGAAAATTGTAACTGCTGCTCACTCAGGGAAGAGGTTTTATGTTGATTCAATACGCTATGATATGTCTGCAGAGAACTCTTTCCCTAGGAAAGAAGGTTATCTTGGTCCTCTGGAGTACAGTTCATATGCTGATTACTACAAGCAAAAGTATGGTGTTGAATTGATTTATAAGCAGCAACCTCTTATAAGAGGGCGTGGTGTGTCATACTGCAAGAATCTTCTGTCCCCTCGATTTGAACACAGTGAAGGACATGAAGGTGAATCTGAAGAATCTCATGACAAAACTTATTATGTGTTCCTTCCTCCTGAGCTATGCCTGGTACACCCTCTGCCTGGTTCACTAGTTCGTGGTGCCCAGAGGTTGCCTTCAATCATGAGGAGGATTGAAAGTATGCTGCTTGCAGTTCAGCTTAAGAATATGATTGATTATCCTGTCCATGCTTTGAAGATCTTAGAAGCCTTGACTGCTGCATCTTGCCAGGAGACATTCTGCTATGAAAGGGCAGAACTTCTGGGAGATGCTTACCTCAAATGGGTTGTTAGTCGATTTCTTTTCCTTAAATACCCACAAAAACATGAAGGCCAGCTTACTAGGATGAGGCAACAAATGGTCAGCAACATGGTATTATATCAGTATGCATTAAGTAAAGGGCTTCAATCATATATTCAAGCGGACCGCTTTGCCCCATCAAGATGGGCAGCTCCCGGGGTTCTGCCTGTTTTTGATGAGGATACCAAGGATGGAGAGTCGACTTTATTTGACCAGGAGAGATCCATTTCTAAAACTGAGAAGATGGATTCTCACACTGATGAATATGAAGATGAACTGGAAGATGGTGAACTTGAGAGTGATTCGAGCTCTTACAGAGTATTGTCCAGCAAGACACTTGCTGATGTTGTGGAAGCATTAATTGGGGTATATTATGTCCAAGGTGGTAAGAGTGCTGCTAACCACCTTATGAACTGGATTGGCATCCAGATAGATTTTGATCCTGATGAGTTGGATTGTACAAGAAAACCATTTAATATTCCAGACAGCATACTTAAAAGTGTTGATTTTGATGCTTTAGAAGGTGCTTTGAACATGAAGTTTAAAGACAAGGGGCTACTGATAGAAGCCATAACTCATGCCTCCAGACCATCATCAGGTGTTTCCTGTTATCAGCGGCTGGAGTTTGTTGGTGATGCAGTCTTGGACCATCTTATTACGAGGCACTTGTTTTTCACTTACACAAATCTGCCACCCGGACGTCTGACTGACCTTCGGGCTGCTGCTGTTAACAATGAAAATTTTGCCCGTGTTGCTGTTAAACACAGTCTTCATGTGCATCTACGACATGGGTCAAGCGCCCTAGAAAAACAGATTAAAGAGTTTGTCAAGGAAGTTCAAGATGAATTGTCAAAGCCAGGCTTTAACTCCTTTGGTCTGGGAGACTGCAAAGCTCCCAAGGTCCTTGGTGACATTGTTGAATCTATTGCTGGAGCCATTTTTCTTGATAGTGGGAGGGATACTGCTGTTGTTTGGAAGGTATTTCAGCCTCTTTTGCATCCTATGGTTACTCCCGAGACTCTGCCAATGCATCCTGTGCGTGAGCTGCAAGAGCGATGCCAGCAGCAGGCTGAAGGCTTGGAATATAGAGCAAGTCGTGTTGGCAATCTGGCCACGGTTGAAGTATTCATCGATGGTGTACAGGTAGGGGCTGCTCAAAATCCACAGAAAAAAATGGCACAGAAATTAGCTGCGAGAAATGCCCTTGCTGCTTTGAAAGAGAAGGAAGTGGCTAAAAATCAGAAGAATGATGAAAATGGGAAAAAGAATGGAAACCAGACATTTACTAGACAGACTTTAAACGATATCTGCTTGCGAAGAAACTGGCCCATGCCGTTCTACCGGTGCGTGAATGAGGGTGGTCCAGCACATGCAAAGAGGTTTACATTTGCGGTGCGTGTCAATACTACTGATAGAGGATGGACCGATGAATGTGTCGGAGAGCCGATGCCAAGCGTCAAGAAGGCCAAAGACTCAGCTGCTGTTCTTCTCTTAGAACTACTAAATAAGTTATACTCATGA 5925 0.4398 MEGGNRVPGSAGEGDPSYWLDACEDISCDFIDFDVSSVASEQPDNTSNQDFFGGIERILDSIKNGGGLPLDAEPNSNASGEPAPWLPHDAPSSAISKVQALAPLAGSNGTVEDGFVKSELVVEKNGRAGDALKRSGAESNGCSKLSNGNDGQILVNCSEESGGVNRGRELLREYDVDGEERCGKRARLGNYKNERHYSGRVNYQLKERERCFSNRKRPRDRDEIDLKRDKDCVRKRENYGTCGRRDARDRDWRDREPRGYWERDKSGSNDMVFRLGTWEADRDREEKMTNDTKQESNGKLEKASEEAKERAPEEKARQYQLDVLDQAKKKNTIAFLETGAGKTLIAVLLIKSIQESLQKQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFDTKHVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKGVSSQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEVVVEYDKAASLYYLHEQIKQMEVEVEEAAKSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAVNYALGELGQWCAYKVAQSFLAALQNDERANYQLDVKFQESYLSKVVSLLKCQLSEGAASDKNAAVDDSKHGGAQSGSEPEEIEEGELPDSHVVSGGEHVDVIIGAAVADGKVTPKVQALIKILLKYQHTEDFRAIIFVERVVSALVLPKVFAELPSLSFVKCASLIGHNNSQEMRTYQMQDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNLSHEAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDTRPGMVYQVESTGAVVSLNSSVGLIHFYCSQLPSDRYSILRPEFIMEKHEKPGGPIEYSCKLQLPCNAPFENLEGPICVSMRLAQQAVCLSACKKLHEMGAFTDMLLPDKGSGGESEKSEQNDEGDPLPGTARHREFYPEGVADILKGEWILSGKDDCNNSKLFHLYMYAVKCENVGNSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFSGLIDINENQLASLKSFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPMVSDKSVDPMNQIDWHLVETIIGAEAWKNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKAHPTYGIRGAVAQFDVVKASGLVPNRDALPTQRNINLTAKAKLMMADTCTNAEDLVGKIVTAAHSGKRFYVDSIRYDMSAENSFPRKEGYLGPLEYSSYADYYKQKYGVELIYKQQPLIRGRGVSYCKNLLSPRFEHSEGHEGESEESHDKTYYVFLPPELCLVHPLPGSLVRGAQRLPSIMRRIESMLLAVQLKNMIDYPVHALKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGESTLFDQERSISKTEKMDSHTDEYEDELEDGELESDSSSYRVLSSKTLADVVEALIGVYYVQGGKSAANHLMNWIGIQIDFDPDELDCTRKPFNIPDSILKSVDFDALEGALNMKFKDKGLLIEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTNLPPGRLTDLRAAAVNNENFARVAVKHSLHVHLRHGSSALEKQIKEFVKEVQDELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTAVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYRASRVGNLATVEVFIDGVQVGAAQNPQKKMAQKLAARNALAALKEKEVAKNQKNDENGKKNGNQTFTRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDRGWTDECVGEPMPSVKKAKDSAAVLLLELLNKLYS* 1975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1097 1974 CDD RIBOc 1435 1615 IPR000999 GO:0004525|GO:0006396
Aev06g1097 1974 MobiDBLite consensus disorder prediction 997 1023 - -
Aev06g1097 1974 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 850 IPR027417 -
Aev06g1097 1974 MobiDBLite consensus disorder prediction 666 693 - -
Aev06g1097 1974 SUPERFAMILY PAZ domain 1273 1394 IPR036085 GO:0005515
Aev06g1097 1974 Coils Coil 1866 1886 - -
Aev06g1097 1974 Gene3D - 311 554 IPR027417 -
Aev06g1097 1974 Coils Coil 290 310 - -
Aev06g1097 1974 ProSiteProfiles Ribonuclease III family domain profile. 1638 1786 IPR000999 GO:0004525|GO:0006396
Aev06g1097 1974 Gene3D - 709 875 IPR027417 -
Aev06g1097 1974 Gene3D paz domain 1270 1392 - -
Aev06g1097 1974 MobiDBLite consensus disorder prediction 64 91 - -
Aev06g1097 1974 Pfam Type III restriction enzyme, res subunit 317 482 IPR006935 GO:0003677|GO:0005524|GO:0016787
Aev06g1097 1974 Pfam Dicer dimerisation domain 911 999 - -
Aev06g1097 1974 MobiDBLite consensus disorder prediction 1545 1569 - -
Aev06g1097 1974 Gene3D - 1902 1972 - -
Aev06g1097 1974 SMART ultradead3 312 515 IPR014001 -
Aev06g1097 1974 Pfam Helicase conserved C-terminal domain 719 836 IPR001650 -
Aev06g1097 1974 SUPERFAMILY RNase III domain-like 1410 1615 IPR036389 GO:0004525|GO:0006396
Aev06g1097 1974 CDD DSRM_DCL_plant 1902 1963 - -
Aev06g1097 1974 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1812 1875 IPR014720 -
Aev06g1097 1974 MobiDBLite consensus disorder prediction 283 314 - -
Aev06g1097 1974 CDD SF2_C_dicer 716 846 - -
Aev06g1097 1974 MobiDBLite consensus disorder prediction 1001 1023 - -
Aev06g1097 1974 Pfam PAZ domain 1276 1414 IPR003100 GO:0005515
Aev06g1097 1974 PANTHER DICER-RELATED 271 1972 - -
Aev06g1097 1974 SUPERFAMILY RNase III domain-like 1637 1807 IPR036389 GO:0004525|GO:0006396
Aev06g1097 1974 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 723 883 IPR001650 -
Aev06g1097 1974 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1896 1971 IPR014720 -
Aev06g1097 1974 Pfam double strand RNA binding domain from DEAD END PROTEIN 1 1896 1969 - -
Aev06g1097 1974 ProSiteProfiles PAZ domain profile. 1254 1394 IPR003100 GO:0005515
Aev06g1097 1974 SUPERFAMILY dsRNA-binding domain-like 1900 1970 - -
Aev06g1097 1974 CDD RIBOc 1654 1809 IPR000999 GO:0004525|GO:0006396
Aev06g1097 1974 ProSitePatterns Ribonuclease III family signature. 1673 1681 IPR000999 GO:0004525|GO:0006396
Aev06g1097 1974 PANTHER ENDORIBONUCLEASE DICER HOMOLOG 1 271 1972 - -
Aev06g1097 1974 SMART DRBM_3 1897 1970 IPR014720 -
Aev06g1097 1974 SMART DRBM_3 1813 1874 IPR014720 -
Aev06g1097 1974 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 323 500 IPR014001 -
Aev06g1097 1974 SMART riboneu5 1653 1809 IPR000999 GO:0004525|GO:0006396
Aev06g1097 1974 SMART riboneu5 1433 1617 IPR000999 GO:0004525|GO:0006396
Aev06g1097 1974 ProSiteProfiles Ribonuclease III family domain profile. 1437 1597 IPR000999 GO:0004525|GO:0006396
Aev06g1097 1974 Gene3D Ribonuclease III domain 1633 1807 IPR036389 GO:0004525|GO:0006396
Aev06g1097 1974 Gene3D Ribonuclease III domain 1417 1609 IPR036389 GO:0004525|GO:0006396
Aev06g1097 1974 ProSiteProfiles Dicer double-stranded RNA-binding fold domain profile. 911 1006 IPR005034 GO:0016891
Aev06g1097 1974 SMART PAZ_2_a_3 1254 1418 IPR003100 GO:0005515
Aev06g1097 1974 SUPERFAMILY dsRNA-binding domain-like 1768 1891 - -
Aev06g1097 1974 Gene3D - 1810 1888 - -
Aev06g1097 1974 CDD DEXHc_dicer 315 514 - -
Aev06g1097 1974 SMART helicmild6 752 838 IPR001650 -
Aev06g1097 1974 MobiDBLite consensus disorder prediction 666 681 - -
Aev06g1097 1974 Pfam Ribonuclease III domain 1673 1786 IPR000999 GO:0004525|GO:0006396
Aev06g1097 1974 Pfam Ribonuclease III domain 1451 1597 IPR000999 GO:0004525|GO:0006396
Aev06g1097 1974 Gene3D Dicer dimerisation domain 906 1008 IPR038248 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1097 Aev-Chr6 7300465 7312283 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1097 735 878 Eukaryotic Initiation Factors Gene Family AT5G11200 29.252 1.94e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1097 K11592 - gmx:100811631 3372.02