Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1093 ATGGACGCGCACTCCTCTGGAGAAGAAGTGTTTGTTAAGACTAGAAAACCATACACAATCACAAAGCAGAGAGAGCGATGGACAGAGGAGGAGCATAATAGGTTCCTAGAAGCCTTGAAGCTATATGGCCGAGCATGGCAGCGCATAGAAGAGCATATAGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCACAGAAATTCTTTTCAAAGTTGGAGAAAGAGGCCCTTGTAAAGGGTGTTCCAATTGGACAAGCTATTGACATAGACATTCCCCCTCCACGGCCCAAAAGAAAACCAAGCAATCCTTATCCCCGCAAGACCAATAATGGTGCCCCGTCATCTCACAGTGGCGCAAAGTATGGAAAGCTTCTCGTTTCAGTTGCATCTTCACATGATAAACAAGCACTGGACTTGGAGAAAGAACCACTTCCAGAGAAGCATAACGAAGATGAAGGGCCAGCAAATGCAAAAGAAAATAAGTGTGAAAGCTTCTCAAAAGCATTCACTGTTCTCGAGGAGGCACCCTGTTCGTCTATATCTTCAGCAGACAAGAATTCAACACCTAAGTCAGTGCAGTTGAGAAGTTCATGCACCTTAAGGGAGTTTATACCTTCAGTGAAAGATGTAATAGCTCGAGATGAGACAAATGAATCTTTTATCACTATTGAACTTGAAAATCAGAAGTTGGAGATACATGATGGGAAACTCACACAGACTGATAGCTCTTGTAAAACCTCCAAGTTGGAGAGTTCTGGTGCTTCACAAGTCAACCAGGCTGAGAAAGCAGATGATCTCAATTGTGCACTAATAATAGATGGAATGCAAGGCAATCAGAATTACCCAAGACATGTAACCGTTCATGTTGTTGATGGGAATAATGGAACTAGTACGCAAAAGCCATCACAAGATATGTTGTTCCGTGACTCCATATTTAAGCCAATAGGAGGAGTTAATGGGCAACCAAATCTTTTCTCCAACTCAGCTGCATCAAACACAAGTGAAAGTCAAAATAACACAGCACGGTCCTCTATTCATCAATCATTTCCTGCTTGTCCTCCCTTCTCACAACATAATCAAGATGATTACCAATCATTTCTTCAGCTGTCCTCCACATTTTCAAGTCTTATTGTCTCTACATTGATGCAAAACCCTGCAGCAAGTTTTGCTGCTACATTTTGGCCATATGCAAATCCAGAAACTACCCCAAATTCTCGCCCGTGCTCTCAAGGGGGTTTTCCATCTACCCAAATTGGTTCTCCTCCAAGTGTGGCAGCTATTGCAGCTGCTACTGTAGCTGCTGCGACTGCATGGTGGGCAGCCCATGGATTGCTTCCGTTGTGTGCTCCACTCCATACTGCTTTTGCCTGTCCTCCTGCATCAGCAGCTGCAGTTCCCTCGGTGAATACTGGTGAAGCATCACCAAAGACAGATCAAGGAGATGTTGTTCTAGAAAATCCTCCTTGTAAAGATCAGACAAAGGATCCAGAATTCCAGGAAGCTCTTCAAGTTCAACATTCAGCTTCTAAGTCAGCAGCTGTTTCTTCATCTGAGTCTGAGGAGAGCGGAGATGCCAAGTTAAATACTTCATCAAAGGCTATGACGAATCTTGACATGAACCAAGAAATTCCTGAGCACCTTGATTCCAACAAAGTGAAGGGCAGAAAACAAGTTGACCGTTCCTCATGTGGTTCCAACACAACCTCCAGCAGTGAAGAGACTGAAGCACTAGAGAAGGATGAGAAAGAAAAGGAAGAGTCCAAAGCACCAGATGCAAACCAATTAGCTACCGAGCCTACTAATCGTCGAAATAGAAACTTTAGCAACCTTATGGAATCTTGGAAGGAGGTATCTGAAGAGGGACGATTGGCCTTTCAGGCTCTATTCTCCAGAGAGGTGTTACCCCAAAGCTTTTCACCTCCGCATGATTTGGTGAAGATGGGCAACAGTAAGGATAACAAGCAAAACATGGACTGCAAAGATGAAGACCTTGACAGCAAGAAATGCAGTTCTAACTTTGAAGGGCTGCAGAAAATTCTGCAATTTGAAGAAAATAACAATGAGGAGGAGGGACTGCTAACCATTGGTCTCGGACAATGTAAGCTCAAGAGCCGTCGAACAGGGTTTAAACCTTACAAAAGGTGTTCAGTTGAGGCCAATGAAACCAGGATTGGAATGGTCTGCAACCAAGGTGAAGAGAAAGGTCCAAAGAGAATACGCTTGGAAGGGGAGGCTTCAACTTGA 2244 0.4403 MDAHSSGEEVFVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPIGQAIDIDIPPPRPKRKPSNPYPRKTNNGAPSSHSGAKYGKLLVSVASSHDKQALDLEKEPLPEKHNEDEGPANAKENKCESFSKAFTVLEEAPCSSISSADKNSTPKSVQLRSSCTLREFIPSVKDVIARDETNESFITIELENQKLEIHDGKLTQTDSSCKTSKLESSGASQVNQAEKADDLNCALIIDGMQGNQNYPRHVTVHVVDGNNGTSTQKPSQDMLFRDSIFKPIGGVNGQPNLFSNSAASNTSESQNNTARSSIHQSFPACPPFSQHNQDDYQSFLQLSSTFSSLIVSTLMQNPAASFAATFWPYANPETTPNSRPCSQGGFPSTQIGSPPSVAAIAAATVAAATAWWAAHGLLPLCAPLHTAFACPPASAAAVPSVNTGEASPKTDQGDVVLENPPCKDQTKDPEFQEALQVQHSASKSAAVSSSESEESGDAKLNTSSKAMTNLDMNQEIPEHLDSNKVKGRKQVDRSSCGSNTTSSSEETEALEKDEKEKEESKAPDANQLATEPTNRRNRNFSNLMESWKEVSEEGRLAFQALFSREVLPQSFSPPHDLVKMGNSKDNKQNMDCKDEDLDSKKCSSNFEGLQKILQFEENNNEEEGLLTIGLGQCKLKSRRTGFKPYKRCSVEANETRIGMVCNQGEEKGPKRIRLEGEAST* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1093 747 Gene3D - 26 73 - -
Aev06g1093 747 SMART sant 23 71 IPR001005 -
Aev06g1093 747 PANTHER PROTEIN LHY 2 728 - -
Aev06g1093 747 MobiDBLite consensus disorder prediction 465 606 - -
Aev06g1093 747 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Aev06g1093 747 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Aev06g1093 747 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Aev06g1093 747 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Aev06g1093 747 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Aev06g1093 747 PANTHER SWI/SNF COMPLEX-RELATED 2 728 - -
Aev06g1093 747 MobiDBLite consensus disorder prediction 86 119 - -
Aev06g1093 747 MobiDBLite consensus disorder prediction 323 354 - -
Aev06g1093 747 MobiDBLite consensus disorder prediction 573 591 - -
Aev06g1093 747 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Aev06g1093 747 MobiDBLite consensus disorder prediction 140 160 - -
Aev06g1093 747 MobiDBLite consensus disorder prediction 544 558 - -
Aev06g1093 747 CDD SANT 26 69 IPR001005 -
Aev06g1093 747 MobiDBLite consensus disorder prediction 498 538 - -
Aev06g1093 747 MobiDBLite consensus disorder prediction 140 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1093 Aev-Chr6 7279978 7285666 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev06g1093 Myb_DNA-binding 2.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1093 K12133 - gmx:780540 976.852