Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1087 ATGCCTATGATTGTGTGGATGAGACCAGAGAAGATGCAATGCAACATAGTAGTAGTAGATAACAAGATTCTTAGAAATTCAAATGACTCTGGTGTTTCCAAATTGGTGGGGTACTGGACCAACGGTCTCCCCCAGCCCGATAGGTCAAGGACTAATCCGTCGCAGTGTGGAACTCCATTTAAAGGTTTAACCGCTGGTCAACGAGTTGCTGCATACATAAGGCGGGGATCGAATCCCCGACCCTTGCTTAAGCGGCCAAACAATGCCCTCTCTCTCTCTCTGCAAGCTCTCACCAACTATCTGAGAGAGAGATTCTTTGGGGAGCATTTGGAAGTAAATTGTTTGGAGCAAGGGTTCGTTGATGCAGAGAGCAACTTTAGACTAGATGAGGATGAACAATCTCTGATATCATCAAGCTTAGAGGATAACATGCCATTCCTGCAGATGCTTCAGAGTGTAGAATCCTCCCCACCATTTTTTCCCTTCAAAGAGCCAAGCTTTCACACACTTGTTAGACTACAGCAGCATCTCAAGAAACCATGGGAAGGGAATGGGATAGCCTATATACCCACTACTCAACAAGCAATGGACTTCGAGAGTTGTGACATGGTGGAGATAATGCAGTCACCATTGAAATCAGAAAGCAATGACCTTCAGCGCACACATTCAGCTTTGTGCGCAGAGAAAGTGGGATACGATGAGTGCAGCCAAGCAGAGCGAACCAAGTCAGGCGAAGATTGTTCCAAAGAGCAGCTTCCTCATCCTCAGGTAGCAACAAGGGAACGGAAAAAGAGAAAGAGAGCAAGACAAGCCAGGAACAAGGAAGATGTTGAGAACCAGCGCATGACACACATTGCCGTGGAACGCAATAGGCGTCGTCAAATGAATGACCATCTCGGTGTTCTAAAGTCTCTAATGCCCCCTTCCTATATTCAAAGGGGTGACCATGCATCAATAATTGGGGGTGCAATAGACTTTGTGAAGGAATTGGAGCAGTTATTTGAATCCCTGGAGGCACAAAAAAGGATGAGGAAGAAGGAAGAGGTTGGTTTTAGTGCAACACCAGCTGCTGATTATGGAATGAGTTCTTCTGCAGAGGAAGCAAATTGTGGGAACAGTGATGTAAAGGCAGAAAGGAAGTCAGAGGGAGCATCCATAGAGGTGACTGTGATTCAAACCCATGTGAACTTGAAAATTCAGTGCCGAAGGAGACACGGCCAACTGGTAAAAGCCATTGTTGCGTTGGAAGAGCTTAGGCTAACTATTCTGCATCTAAACATCACATCCTCAGAGGCTTCGGTACTCTACTCTTTCAATCTCAAGATTGAAGAAGAGAGTAAGCTAGGGTCAGCAAATGAAATTGCAGCGGCGGTTGATCACATATTCAGCTTCATTAATGGTTAG 1404 0.4558 MPMIVWMRPEKMQCNIVVVDNKILRNSNDSGVSKLVGYWTNGLPQPDRSRTNPSQCGTPFKGLTAGQRVAAYIRRGSNPRPLLKRPNNALSLSLQALTNYLRERFFGEHLEVNCLEQGFVDAESNFRLDEDEQSLISSSLEDNMPFLQMLQSVESSPPFFPFKEPSFHTLVRLQQHLKKPWEGNGIAYIPTTQQAMDFESCDMVEIMQSPLKSESNDLQRTHSALCAEKVGYDECSQAERTKSGEDCSKEQLPHPQVATRERKKRKRARQARNKEDVENQRMTHIAVERNRRRQMNDHLGVLKSLMPPSYIQRGDHASIIGGAIDFVKELEQLFESLEAQKRMRKKEEVGFSATPAADYGMSSSAEEANCGNSDVKAERKSEGASIEVTVIQTHVNLKIQCRRRHGQLVKAIVALEELRLTILHLNITSSEASVLYSFNLKIEEESKLGSANEIAAAVDHIFSFING* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1087 467 Coils Coil 260 280 - -
Aev06g1087 467 Pfam Helix-loop-helix DNA-binding domain 280 331 IPR011598 GO:0046983
Aev06g1087 467 CDD bHLH_AtFAMA_like 282 355 - -
Aev06g1087 467 Gene3D - 277 349 IPR036638 GO:0046983
Aev06g1087 467 Coils Coil 327 347 - -
Aev06g1087 467 MobiDBLite consensus disorder prediction 355 376 - -
Aev06g1087 467 PANTHER MAX DIMERIZATION, MAD 118 466 - -
Aev06g1087 467 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 279 347 IPR036638 GO:0046983
Aev06g1087 467 SMART finulus 285 336 IPR011598 GO:0046983
Aev06g1087 467 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 279 330 IPR011598 GO:0046983
Aev06g1087 467 PANTHER TRANSCRIPTION FACTOR BHLH70 118 466 - -
Aev06g1087 467 MobiDBLite consensus disorder prediction 240 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1087 Aev-Chr6 7241717 7245433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1087 149 462 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46810 41.111 1.93e-67 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev06g1087 HLH 3.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1087 - - gmx:100789928 425.631