Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1085 ATGATGAAGATGCAGATGCAGGAAGGGGAGCAGATCAAGAAGCACAAGGGTGAGAATGCCTGGACTGGGGGGGAGCTCGCAGTTCGGTGGGAGAGGTTTCTACCTCGGATGGCGCTCAGAGTGTTGCTTGTTGAAGCTGATGATTCTACCCGCCAGATTATCGCTGCTCTTCTCCGTAAATGCAATTACAGAGTTGCTGCAGTTCCTGATGGCCTAAAGGCATGGGAGACATTGAAGAACAAAGCTCCTGACATAGATCTTATACTAACTGAAGTGGAGTTGCCATCGATATCTGGATTTTCACTTCTTACCTTAATCATGGAGCATGACGTTTGCAAAAACATTCCTGTCATAATGATGTCTACACATGATTCAGTTAACATGGTGTACAAGTGCATGTTGAAAGGTGCAGCTGATTTTCTCATAAAGCCTGTTCGGAGGAATGAGCTAAGGAACTTGTGGCAGCACGTGTGGAGAAGACATGCTATTAGCAGGCCTCCTCAGAGTTTAGCATTACCACATAATAAACTTGAAGTTGCTGCAGAAAACAATGCTGCAAGTATTTCTAGTGGTTCTGTGGCTTCCCCGCAGAAAAATAATGAATGCAGTGAGAAAACAGGTGATGCTCAAGATACCTCCGAGCTGAAAAGTTCTTCAAATTTGAGCAATATGGACACAGTGAAGCATGAAGAGCTTGTTGAATTTGAAAGAGTATCAGCTAAACAAAATGATGAAGGAGGAGAGAAACCAGTTATGTTTGTATCGGAAGCTTCAAGGTGCAACAAAACTTTTAATTCGACAGGTTTAAGGCTTGACCAAGGCTATGGTCAAAATGAGATAGAAACCGAAGATGATGTTCTAAGAAGAGAGTCAATCAAAGCCAATCCTCATATGAATACAGAGATTCATGAATGTAGTGATGAACTGGCAGAACTGTCTAGAGGGGCTATTGACTTGATTGCCACATTTGATAATCTTCCAAAGAGCACTGATGAGAACTGTAGTTTCAATGGTGAAAATGCATACAAGTCTGATTTTAATACGCAATTGGAACTTTCTCTTAAAAGTGATTTTCCTGGTAGCTCATGTAAACCTACAACTGAGGAAAGACAAATATTGAACCATTCAAATGCTTCTGCCTTTTCTTGGTATAGCAGTAGTAAGCTGTTGCAACCCCTTTTTCCATCACCATCAATTGCTTCTGCTAAGTTATCTAATTCTGATGATTCCCTTAAATTATCTGAAAGTACAAGTTCTTTTCATCAGTATGGTGGCAAAAGTAGGAATCCGAATGTGGCCACTCTGGTCATTGGTCAGACTGGACAAGTTGAACCAAAATCACCAAATAATCAACATGAGTTCTTCCCTGCTGCTACTGGGTTCATCTCTGATCATAAGTCTGCGGTGCGTGGTAATGTTTTCCCTTCTATGCTATATGCACAATCAGGTGTCCAACCCATATGTACTCCCAAATCAGTGTGCCAGAAAGAGAGTTCTCCATTTCCCACTAGTGCTTCCTCCCAGTCCAATCCTGAAAGTCACAACTCAGAACAGCATCGCTGGTCAGAGGATGCTATATATACTTCTGACCAAAATGTAGATGACCTAAGCAATTTGGATTTTGCAAAGCAAGACTCTTCTGCCACGGGTCAGAGTGCTGGCACTAGTTTTTACCATGAAAATCATATTAGTAATGGTGCATACGAAAGCATAGGCAGTGGAAGTGATGCAAATGCTTCTTCAGCTGTGGTAGCTAGGAACAACCCTGAAAGTTTCATTGATAGTAGTCAGCAAAGTTATGATGGATCAAGAGGGACTGATTCTCATCTCACCAGCCAAAGAGAAGCAGCTCTTACAAAGTTTAGGCTGAAGCGGAAAGACAGATGCTTTGAGAAGAAGGTCCGATATCAGAGCCGGAAAAGGCTGGCAGAGCAGCGCCCTCGGGTGAAAGGGCAATTTGTCCGTCAGGTACACAATAATCATCCAGTAGCAGATGCCGGTGGTGGTTCCTAA 2013 0.4267 MMKMQMQEGEQIKKHKGENAWTGGELAVRWERFLPRMALRVLLVEADDSTRQIIAALLRKCNYRVAAVPDGLKAWETLKNKAPDIDLILTEVELPSISGFSLLTLIMEHDVCKNIPVIMMSTHDSVNMVYKCMLKGAADFLIKPVRRNELRNLWQHVWRRHAISRPPQSLALPHNKLEVAAENNAASISSGSVASPQKNNECSEKTGDAQDTSELKSSSNLSNMDTVKHEELVEFERVSAKQNDEGGEKPVMFVSEASRCNKTFNSTGLRLDQGYGQNEIETEDDVLRRESIKANPHMNTEIHECSDELAELSRGAIDLIATFDNLPKSTDENCSFNGENAYKSDFNTQLELSLKSDFPGSSCKPTTEERQILNHSNASAFSWYSSSKLLQPLFPSPSIASAKLSNSDDSLKLSESTSSFHQYGGKSRNPNVATLVIGQTGQVEPKSPNNQHEFFPAATGFISDHKSAVRGNVFPSMLYAQSGVQPICTPKSVCQKESSPFPTSASSQSNPESHNSEQHRWSEDAIYTSDQNVDDLSNLDFAKQDSSATGQSAGTSFYHENHISNGAYESIGSGSDANASSAVVARNNPESFIDSSQQSYDGSRGTDSHLTSQREAALTKFRLKRKDRCFEKKVRYQSRKRLAEQRPRVKGQFVRQVHNNHPVADAGGGS* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1085 670 SUPERFAMILY CheY-like 39 170 IPR011006 -
Aev06g1085 670 MobiDBLite consensus disorder prediction 494 520 - -
Aev06g1085 670 MobiDBLite consensus disorder prediction 494 515 - -
Aev06g1085 670 Pfam CCT motif 614 656 IPR010402 GO:0005515
Aev06g1085 670 ProSiteProfiles CCT domain profile. 614 656 IPR010402 GO:0005515
Aev06g1085 670 Pfam Response regulator receiver domain 41 152 IPR001789 GO:0000160
Aev06g1085 670 ProSiteProfiles Response regulatory domain profile. 40 158 IPR001789 GO:0000160
Aev06g1085 670 MobiDBLite consensus disorder prediction 592 613 - -
Aev06g1085 670 CDD psREC_PRR 41 144 - -
Aev06g1085 670 MobiDBLite consensus disorder prediction 187 223 - -
Aev06g1085 670 SMART REC_2 39 154 IPR001789 GO:0000160
Aev06g1085 670 MobiDBLite consensus disorder prediction 187 203 - -
Aev06g1085 670 PANTHER PRR RESPONSE REGULATOR 217 666 - -
Aev06g1085 670 PANTHER PRR RESPONSE REGULATOR 31 211 - -
Aev06g1085 670 PANTHER TWO-COMPONENT RESPONSE REGULATOR 217 666 IPR045279 GO:0009736
Aev06g1085 670 PANTHER TWO-COMPONENT RESPONSE REGULATOR 31 211 IPR045279 GO:0009736
Aev06g1085 670 Gene3D - 37 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1085 Aev-Chr6 7232969 7236776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1085 613 661 Response Regulator Gene Family AT5G24470 81.633 5.59e-20 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Aev06g1085 Response_reg 3.2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1085 K12130 - gmx:100809490 860.907