Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1079 ATGTCGATTGGAGAAACTGCTTGCAGCTACGCTCTTATGATCCTTAACGATGAACAAATCCCTGTCACCGCTGACAAGATCTCTACCTTGTTGAAAAGCGCAAAGGTTCAAGTTGAATCATACTGGCCCAGCTTGTTTGCCAAACTTGCTGAGAAGAAAAGCATTGATGATTTGATTGCCGGTGCTGGTGGAGGTGGTGCTCCAGTAGCTGTTGCAGCTGCCCCAGTTGCTGCTGCAGGCGGTGGTGCTGCAGCTGCTCCTGCTGCTGAGGAGAAGAAGAAGGAAGAACCCGAAGAAGAGAGTGATGATGATATGGGATTCAACTTGTTTGACTAG 336 0.4881 MSIGETACSYALMILNDEQIPVTADKISTLLKSAKVQVESYWPSLFAKLAEKKSIDDLIAGAGGGGAPVAVAAAPVAAAGGGAAAAPAAEEKKKEEPEEESDDDMGFNLFD* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1079 111 MobiDBLite consensus disorder prediction 96 111 - -
Aev06g1079 111 Hamap 50S ribosomal protein L12 [rpl12]. 6 111 IPR027534 GO:0003735|GO:0005840|GO:0006414
Aev06g1079 111 CDD Ribosomal_P1 5 59 - -
Aev06g1079 111 Gene3D - 1 63 IPR038716 -
Aev06g1079 111 MobiDBLite consensus disorder prediction 83 111 - -
Aev06g1079 111 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN 1 103 - -
Aev06g1079 111 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 103 - -
Aev06g1079 111 Pfam 60s Acidic ribosomal protein 22 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1079 Aev-Chr6 7213763 7214553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1079 1 111 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 54.386 1.91e-34 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1079 K02942 - gmx:100791962 111.694