LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev06g1078	ATGGGGAAGTCATGGTTGACTGCTGTGAAAAGGGCATTCAGATCTCCAACCAAGGACACTCACAAAAAGAGCAAAACAAGAGACGACACTGCACACCAACAAGACCAAGACCAAGACAAGAGAGACCGAAGAAGATGGGCTTTCAGAAAACAAGCAAACCAGGAGACAGTAGTGAGTACTCAAATGAAGGTGAAGCCTTCTTCAACTGCAGACCAATCTGTGTCTGTGGTGGCAGTGGCCACAGCAACAGATCAAAGGCGTGCAGTTGCTGTGGCAGTGGCCACCGCGCAGCCGGCAAGGCTCAACAACAGTCGTGGTACTGGTGGCAGGGATAGGAACCGACATCATTATGCTGCTATTGTGATTCAAACTGCTTTCAGAGGATACTTAGCAAGAAGAGCGCTTCGTGCGCTTAGGGGGCTGGTGAAGTTGCAAGCGTTGGTAAGGGGTCACAATGTCCGGAAGCAGGCGAAGATGACCCTTCGGTGCATGCAGGCTCTTGTTCGGGTTCAATCACGGGTGCTTGACCGCCGCACAAGGTTCTCCCACGAAGGCAGTTCTAGCAGAAAATCCACTTTCAGCGACACCAATAGCGTTTGGGAATCTCGCTATCTTCATGACATCTCAGATAGGAAGTCAATGTCAAGAGAGGGAAGTAGCATCGCAAGTGACTGGGATGAGCGTCCACACACAGTTGAAGAAGTTAAAGCCATGTTGCAGAGGAGGAAAGAAGCAGCAGCAGCTATGGCTATGAGGCGAGACAAGTCTTCTTCTCAACAGATTCGGAGGAACGGAGGGAAGTCATCAATGGTCAACGAAGATGATTTAGAAGAGAGACCAAAAAGGATGGATGGATGGAAGAGTACGAAGCCATGGGAGAACAGGGGAAGAGCCTCAACAGATCAGAGAGACCCCATTAAGAATGTGGAAATGGACACTCTTCAACCATACTCATATTTAGGAACTAGTAATTACCGAAGGTCACATCCAAATTACCAATATAATCCTCCACAGTTACACCAACCACAGAGGCATTCGATTGCATCCCCACACCACAGAACCACCCAAAATGCACCAACGCAACGCTCCCCTGCAACCCCATCGCCGTCAAAATCAAGACCCATCCAAGTCCGGTCCGCGAGCCCTCGCTATAGCAGAGAAGACAGAAGCTACCATACACCTCAAACACCGAATTTGAGGTTGAATAATAGTAATAGTAATCATAATAATTATAGGGGAAATAATATCAGCCTAAGTAGCAGGGGAGGAACAAGTAATGGTGGGGCTGGTATGCCAAATTACATGGCAGCGACGGAGTCGGCAAAGGCTAGGAGTCGGTCTCAGAGTGCCCCGAGGCAGAGGGCATCGACTCCAGAGAGAGAGAGGGACAGAGTAGGGTCAGCAAGGAAAAGACTGTCGTACCCTGCAGCACATGATCCTTATAATGTGGGAATGGCGAATAGTTTGAGGAGTCCAAGCTTTAAGAGTGTATGTGGATCACATTTTGGGTTAGAGCAGCACTCCAACTACTCTTCCTGCTGCACTGACAGTTTTGCCGGTGAGATTTCTCCTTCTTCAACTAGTGACCTTAGAAGGTGGTTGAGATGA	1608	0.4888	MGKSWLTAVKRAFRSPTKDTHKKSKTRDDTAHQQDQDQDKRDRRRWAFRKQANQETVVSTQMKVKPSSTADQSVSVVAVATATDQRRAVAVAVATAQPARLNNSRGTGGRDRNRHHYAAIVIQTAFRGYLARRALRALRGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQSRVLDRRTRFSHEGSSSRKSTFSDTNSVWESRYLHDISDRKSMSREGSSIASDWDERPHTVEEVKAMLQRRKEAAAAMAMRRDKSSSQQIRRNGGKSSMVNEDDLEERPKRMDGWKSTKPWENRGRASTDQRDPIKNVEMDTLQPYSYLGTSNYRRSHPNYQYNPPQLHQPQRHSIASPHHRTTQNAPTQRSPATPSPSKSRPIQVRSASPRYSREDRSYHTPQTPNLRLNNSNSNHNNYRGNNISLSSRGGTSNGGAGMPNYMAATESAKARSRSQSAPRQRASTPERERDRVGSARKRLSYPAAHDPYNVGMANSLRSPSFKSVCGSHFGLEQHSNYSSCCTDSFAGEISPSSTSDLRRWLR*	536

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev06g1078	535	MobiDBLite	consensus disorder prediction	268	308	-	-
	Aev06g1078	535	Pfam	IQ calmodulin-binding motif	142	158	IPR000048	GO:0005515
	Aev06g1078	535	Pfam	IQ calmodulin-binding motif	118	136	IPR000048	GO:0005515
	Aev06g1078	535	PANTHER	PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1	3	535	-	-
	Aev06g1078	535	MobiDBLite	consensus disorder prediction	243	260	-	-
	Aev06g1078	535	MobiDBLite	consensus disorder prediction	391	427	-	-
	Aev06g1078	535	MobiDBLite	consensus disorder prediction	315	379	-	-
	Aev06g1078	535	MobiDBLite	consensus disorder prediction	455	469	-	-
	Aev06g1078	535	SMART	iq_5	137	158	IPR000048	GO:0005515
	Aev06g1078	535	SMART	iq_5	114	136	IPR000048	GO:0005515
	Aev06g1078	535	MobiDBLite	consensus disorder prediction	1	43	-	-
	Aev06g1078	535	MobiDBLite	consensus disorder prediction	243	469	-	-
	Aev06g1078	535	MobiDBLite	consensus disorder prediction	19	43	-	-
	Aev06g1078	535	Gene3D	-	112	166	-	-
	Aev06g1078	535	ProSiteProfiles	IQ motif profile.	139	166	IPR000048	GO:0005515
	Aev06g1078	535	ProSiteProfiles	IQ motif profile.	115	143	IPR000048	GO:0005515
	Aev06g1078	535	Pfam	Protein of unknown function (DUF4005)	381	485	IPR025064	-
	Aev06g1078	535	PANTHER	IQ-DOMAIN 5-RELATED	3	535	-	-
	Aev06g1078	535	MobiDBLite	consensus disorder prediction	440	454	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev06g1078	Aev-Chr6	7209430	7211460	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev06g1078	5	535	IQD Protein Family	AT4G00820	51.404	3.19e-157	457

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev06g1078	-		-	adu:107472901	610.527