Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1067 ATGTTAGATCGCATGGAAGAATACTCCCATTCATCAGACGCAGAGACTTACAGCAGCACAACTTCACCAGCAGCCATGAAAAAGAAGAGGACTTCCAAAAACAAAAGAAGGTTCAGCGATGAACAGATCAAGTCACTGGAATCTATGTTTCAGACAGAGTCAAGGCTGGAACCTATAAAGAAGATGCAGATGGCAAGAGAGCTCGGGTTGCAGCCACGACAGGTTGCTATATGGTTTCAGAATAAGAGAGCTCGATGGAAATCGAAGCAGCTTGAGCGAGACTACACCGTGCTTCGAGCCAATTATAACTGTTTGGCTTCACGCTTTGAATCTCTCAAGAAGGAGAAGCAGGCATTGCTAATGCAGTTGCAGATGCTGAATGATCGAATAAAGAAGCAACCAGAGGAAACTAATAAAGATCAAGGAGTGAATAGCGTGTGCAATGTATCAGAAAATGGTGGTGACACAAACAGAAGTGAACCGGAGGCAAAGCCAAGCCCGTCAAGGGAAAGATCAGACAGCATAGTCGGGGTTGTGTCGGACGGTGACAGCTGTGTAAGGGCAGAATACTTTGGCCTGGAAGATGAACCTGGCCTTTTGAATTTTGCTGAGCATGCTGATGGAACTTTGACATCATCAGAAGATTGGGGCACCTTTGATTCCAATGATCTCTTAGGCCAATCAACCAGTGACTATCAATTGTGGGACTTCTGGTCCTGA 720 0.4556 MLDRMEEYSHSSDAETYSSTTSPAAMKKKRTSKNKRRFSDEQIKSLESMFQTESRLEPIKKMQMARELGLQPRQVAIWFQNKRARWKSKQLERDYTVLRANYNCLASRFESLKKEKQALLMQLQMLNDRIKKQPEETNKDQGVNSVCNVSENGGDTNRSEPEAKPSPSRERSDSIVGVVSDGDSCVRAEYFGLEDEPGLLNFAEHADGTLTSSEDWGTFDSNDLLGQSTSDYQLWDFWS* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1067 239 CDD homeodomain 27 90 IPR001356 GO:0003677
Aev06g1067 239 Pfam Homeobox associated leucine zipper 89 129 IPR003106 GO:0006355|GO:0043565
Aev06g1067 239 SMART HOX_1 26 93 IPR001356 GO:0003677
Aev06g1067 239 MobiDBLite consensus disorder prediction 1 43 - -
Aev06g1067 239 ProSitePatterns 'Homeobox' domain signature. 64 87 IPR017970 GO:0000981|GO:0006355
Aev06g1067 239 ProSiteProfiles 'Homeobox' domain profile. 29 89 IPR001356 GO:0003677
Aev06g1067 239 Coils Coil 109 133 - -
Aev06g1067 239 MobiDBLite consensus disorder prediction 12 27 - -
Aev06g1067 239 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-7 6 239 - -
Aev06g1067 239 Pfam Homeodomain 33 87 IPR001356 GO:0003677
Aev06g1067 239 Gene3D - 24 96 - -
Aev06g1067 239 PRINTS Lambda-repressor HTH signature 69 85 IPR000047 GO:0003677
Aev06g1067 239 PRINTS Lambda-repressor HTH signature 60 69 IPR000047 GO:0003677
Aev06g1067 239 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 6 239 IPR045224 GO:0003700
Aev06g1067 239 MobiDBLite consensus disorder prediction 134 175 - -
Aev06g1067 239 MobiDBLite consensus disorder prediction 139 161 - -
Aev06g1067 239 SUPERFAMILY Homeodomain-like 11 91 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1067 Aev-Chr6 7134416 7135222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1067 26 239 Homeobox Transcription Factor Family AT2G46680 51.282 4.37e-62 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev06g1067 Homeodomain 3.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1067 K09338 - gmx:100797862 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1067 06 7134416 7135222 Aev02g0148 02 1036741 1038032 PCT