Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1046 ATGGGAAGAGCTCCGTGTTGTTCAAAGGTTGGGTTGCACAGAGGTCCATGGACTCCTCGAGAAGATGCATTGCTCACCAAATATATTCAAGCTCATGGAGAAGGCCAGTGGAGATCCCTTCCTAAAAGAGCTGGACTTCTACGATGTGGAAAGAGTTGCAGACTGAGATGGATGAACTATCTGAGACCGGACATAAAGAGAGGAAACATTACTCCCGAAGAAGACGACTTGATCATCAGAATGCACTCTCTTCTCGGAAATAGATGGTCCCTCATCGCCGGAAGACTGCCGGGAAGAACCGATAATGAGATCAAGAACTACTGGAATACCCATCTCAGCAAAAAGCTTACAAGTCAAGGAACGGATCCAAACACACACAAAAAGTTACTAATTAAAGATCCCCTTCAACAACTAGCCAACAACAAGAAGAGCACCAAGAGGAGCAACAAGAAGAAAATTTGTAATAATAAGCCCAGAAAGAATGATGTCGAGGTTAACAGAGACACGAATATAGAGACAGAGACAGAGACGATAGAGAAGAGTAAGACAGTTGTTTATCAACCGAAACCAGTAAGGGTAGTATCGGCTTTATCTTTGTCGTCATCATTAGTTTCTATTCCAAGAACGGAGAGTACTACTTTCACGTTGGAGTCCAACAATTCAGGGAGTGCAGCATCAACAAGAAGCCATGATAAGTTAGAACCAAGTTGCCAGCAAGAAGAAGACAACGTGGCTGGGGTAGTAGGCAGTGTTAATGAGGGAGAAAGTGATGAGGGGTTTCAATATTTTGGTGAAGATCATCGTGATGATGATGTTGACTTGGTCAATGGTTCTGATTACATGGAGTGCCAATCCTATTACTTGGAGAAGATCTATGAGGAGTACTTTCAGCTGTTGACCATGGAAGAATTAGTGGTGGAACAAGAAGAGAACCAGCAGCACGACGTGGATTCTTTTGCTGAATCTTTATTGGTGTAA 978 0.4315 MGRAPCCSKVGLHRGPWTPREDALLTKYIQAHGEGQWRSLPKRAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKLTSQGTDPNTHKKLLIKDPLQQLANNKKSTKRSNKKKICNNKPRKNDVEVNRDTNIETETETIEKSKTVVYQPKPVRVVSALSLSSSLVSIPRTESTTFTLESNNSGSAASTRSHDKLEPSCQQEEDNVAGVVGSVNEGESDEGFQYFGEDHRDDDVDLVNGSDYMECQSYYLEKIYEEYFQLLTMEELVVEQEENQQHDVDSFAESLLV* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1046 325 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev06g1046 325 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Aev06g1046 325 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev06g1046 325 CDD SANT 16 61 IPR001005 -
Aev06g1046 325 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev06g1046 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Aev06g1046 325 MobiDBLite consensus disorder prediction 213 238 - -
Aev06g1046 325 PANTHER MYB TRANSCRIPTION FACTOR 1 303 - -
Aev06g1046 325 SMART sant 13 63 IPR001005 -
Aev06g1046 325 SMART sant 66 114 IPR001005 -
Aev06g1046 325 MobiDBLite consensus disorder prediction 140 162 - -
Aev06g1046 325 CDD SANT 71 112 IPR001005 -
Aev06g1046 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Aev06g1046 325 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Aev06g1046 325 Gene3D - 71 170 - -
Aev06g1046 325 Gene3D - 14 66 - -
Aev06g1046 325 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 303 - -
Aev06g1046 325 MobiDBLite consensus disorder prediction 213 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1046 Aev-Chr6 7022262 7024130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1046 4 143 MYB Transcription Factor Family AT3G13540 67.832 8.77e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev06g1046 Myb_DNA-binding 2.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1046 K09422 - gmx:100803345 335.495