Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1045 ATGGATATGATGATGATGGATGGGCATGGTGAGGGGAAGGCGAGGAGCCAACAACCATGCGCAGCTTGCAGGATGCTACGGCGGAGATGTGAGAGCAACTGCCTACTTGCTCCATATTTCCCAACTCACGACCTCCATAAATTTCTTGGAGTCCATAAAGTCTTCGGTGCTAGCAACCTTATCAAAATGATTCAGATGGTGGAGGAGACAAAGAGGGAGGATGCAGTGAAAGGCATAGTGTACGAGGCCATGGCAAGGCTTCGAGACCCAGTTTATGGGAGCGCCGGATCCATTTTCCGCCTCCAACAATTGATTCTACAACTCAAAGCGGACCTCCAATCTATCACGAGTCAGGTATCGGAGCTGCGAGATCAAAAGGACCACTTGTTGAGCATAATTCATAACAACAACAACAATAATGATGATGCTTCTATACTGTTCGATGGCTGTTGCACTAGTTCTTTCTCTGTAGACGACCTCGATCAACTCATCACGCCTTTTGACTCTTTTCTTGAATTCCAAGTTTCCCCACAAGATGGGGATACTTTAATATCTACCAATACCAATAATCCGTACGGTGTAATGCTATGGTGA 594 0.4613 MDMMMMDGHGEGKARSQQPCAACRMLRRRCESNCLLAPYFPTHDLHKFLGVHKVFGASNLIKMIQMVEETKREDAVKGIVYEAMARLRDPVYGSAGSIFRLQQLILQLKADLQSITSQVSELRDQKDHLLSIIHNNNNNNDDASILFDGCCTSSFSVDDLDQLITPFDSFLEFQVSPQDGDTLISTNTNNPYGVMLW* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1045 197 Pfam Lateral organ boundaries (LOB) domain 19 115 IPR004883 -
Aev06g1045 197 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1-LIKE 12 159 - -
Aev06g1045 197 ProSiteProfiles LOB domain profile. 18 119 IPR004883 -
Aev06g1045 197 Coils Coil 105 125 - -
Aev06g1045 197 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1045 Aev-Chr6 7016079 7016764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1045 19 135 AS2 family AT1G07900 51.282 2.93e-41 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev06g1045 LOB 1.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1045 - - ccaj:109796546 193.356