Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1042 ATGGCACATGCGGACTCTAGTCTCAGGGGCCCTGTCACTTCTCAAGCTGAAACAGGTGTGGGAGAAGACGATCTATACACAGAGCTATGGAAGCTGTGTGCAGGGCCTTTGGTGGATGTTCCTCGTGCTGGAGAGAGGGTGTTCTACTTCCCTCAGGGTCACATGGAACAATTGCAAGCATCAACGAATCAGGAGCTAAACCAGGAACTGAGCCAGCAAATTCCTCACTTCAATCTCCCATCCAAGATTCTGTGCCGTGTCGTGCACATTCAGTTGCTGGCGGAACAAGAAAGTGATGAAGTTTATGCCCGCATCACTTTGCTCCCAGAACCAGATCAAAATGAACCTACGGATCCTGATCCAAGTCCACCCGAGACGCAAAAGCAGACTTTTCACTCCTTCAGCAAGATACTAACTGCCTCTGATACTAGCACTCATGGAGGATTTTCAGTTCTTCGTAGGCACGCGACAGAGTGCTTACCTCAATTGGACATGTCCCAACCTACCCCAACTCAAGAATTGGTAGCCAAGGATCTTCATGGGTTCGAGTGGAAGTTTAAGCACATATTCAGAGGTCAACCTAGGAGGCACTTGCTCACAACTGGCTGGAGTACTTTTGTTACATCCAAACGATTGGTTGCTGGGGATGCTTTTGTGTTCTTAAGGGGAGGGAACGGGGAACTGAGAGTCGGTGTGAGGCGTCTTGCACGGCAGCAGAGTCCAATGCCTTCATCCGTGATATCAAGCCAGAGTATGCATCTTGGGGTTCTTGCCACCGCTTCCCATGCTGTTTTAACCACTACCATGTTTGTGGTTTATTATAAGCCAAGGACCACCCAGTTCATTATTGGCCTCAATAAATATCTGGAGGCAGTCAACAATAAGTTCTCAGTTGGTATGCGATTCAAGATGAGATTCGAGGTGGAGGACTCACCTGAGAGAAGGTTTTCTGGTACTATTGTTGGGGTTGGGGATGTGTCACCAGGCTGGTCAAACTCTCAATGGCGTTCATTAAAGGTTCAATGGGATGAGCCAGCAACCATTCCCAGGCCAGAGAGGGTTTCTTCTTGGGAGATAGAGCCTTTTGTAGCTTCTGCTGCTTTAAATGTTACTCAGCCTGTGGTGAAGAGCAAACGGTCCCGGCCTGCTGATCTTCCATCATCTGAAGTTGCTCCAAATGCTCCTGCTTCGGGTTTCTGGTATCATGGTTCAGCCTTGTCCCATGAGCCTACACACTTAGGTGCCACCGCAGACGCTCAGAGCAACCAAAACCAGGCTGTGTGGTCTCTGAGGCAGAAGGAAATTAATGGAAATCCAGTGAATACACATTCCAGCAGCACTAGGGTCCGTGTGGAAGGAATATGGTCAACATCCCCACATTTGAGTAATGTCCCTTCCAACTTTCTTGCTGACCCCAAAAACAACAAAGCTGTTGCGAAACAGTCACCAATCTCAGGCCACTCTCCTGTTTCATCCAAGGCAAATGATGGTTCGGCTCATGATCAAGTGGAAGATGGTAAAAGGAGTGAGAATCCCACAGAGATATGGGTATTTGGAGTTAATTTGACCAACAACTTTACCAAAGAACTGGGAAGTCCAGCAATTATTACTCCAAGTGGTCCCAAAGAATCTACTGCTATTGCTGCATGTGAAACTGAGGATGGTCAGAATTCCAATTACTCATCACTGTCCAATAAGGAGCAGAAGCAAATTATTTCTGATGCATCACCAGCTGAGAAGCCATCCAAGCCCAACTCTGTACCATCCATGAGGACTCGCACCAAGGTGCAAATGCAAGGTGTAGCTGTGGGCCGCGCTGTGGACTTGACCTTGTTGAAAGGGTATGATGATCTAATTGATGATCTCGAGAAACTGTTTGATATTAAGGGAGAGCTTCGGTCACAAAACAAATGGGCAGTTACTTTTACCGACGATGAAAATGACATGATGCTCGTCGGCGATGATCCATGGCCGGAGTTCTGCAACATGGTGAAGCGGATTTTCATCTATTCAAAGGAAGATGTAAAGAAGATGAAATACAAGCTTTCTGCGCCCTCATCAGATGGTGAAGAGACTTTGTTGAGCCCAGATTCACAGACCAAGGATGACACTCAACAAATCTCTTATGCATAA 2133 0.4721 MAHADSSLRGPVTSQAETGVGEDDLYTELWKLCAGPLVDVPRAGERVFYFPQGHMEQLQASTNQELNQELSQQIPHFNLPSKILCRVVHIQLLAEQESDEVYARITLLPEPDQNEPTDPDPSPPETQKQTFHSFSKILTASDTSTHGGFSVLRRHATECLPQLDMSQPTPTQELVAKDLHGFEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGGNGELRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVLTTTMFVVYYKPRTTQFIIGLNKYLEAVNNKFSVGMRFKMRFEVEDSPERRFSGTIVGVGDVSPGWSNSQWRSLKVQWDEPATIPRPERVSSWEIEPFVASAALNVTQPVVKSKRSRPADLPSSEVAPNAPASGFWYHGSALSHEPTHLGATADAQSNQNQAVWSLRQKEINGNPVNTHSSSTRVRVEGIWSTSPHLSNVPSNFLADPKNNKAVAKQSPISGHSPVSSKANDGSAHDQVEDGKRSENPTEIWVFGVNLTNNFTKELGSPAIITPSGPKESTAIAACETEDGQNSNYSSLSNKEQKQIISDASPAEKPSKPNSVPSMRTRTKVQMQGVAVGRAVDLTLLKGYDDLIDDLEKLFDIKGELRSQNKWAVTFTDDENDMMLVGDDPWPEFCNMVKRIFIYSKEDVKKMKYKLSAPSSDGEETLLSPDSQTKDDTQQISYA* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1042 710 MobiDBLite consensus disorder prediction 554 572 - -
Aev06g1042 710 Gene3D - 587 679 - -
Aev06g1042 710 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 9 684 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev06g1042 710 Pfam Auxin response factor 260 339 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev06g1042 710 MobiDBLite consensus disorder prediction 475 511 - -
Aev06g1042 710 Pfam AUX/IAA family 634 672 IPR033389 -
Aev06g1042 710 Pfam AUX/IAA family 573 627 IPR033389 -
Aev06g1042 710 SUPERFAMILY DNA-binding pseudobarrel domain 124 263 IPR015300 -
Aev06g1042 710 MobiDBLite consensus disorder prediction 478 497 - -
Aev06g1042 710 SUPERFAMILY CAD & PB1 domains 582 667 - -
Aev06g1042 710 ProSiteProfiles B3 DNA-binding domain profile. 134 236 IPR003340 GO:0003677
Aev06g1042 710 PANTHER AUXIN RESPONSE FACTOR 11 9 684 - -
Aev06g1042 710 MobiDBLite consensus disorder prediction 110 130 - -
Aev06g1042 710 Pfam B3 DNA binding domain 134 234 IPR003340 GO:0003677
Aev06g1042 710 Gene3D - 131 235 IPR015300 -
Aev06g1042 710 MobiDBLite consensus disorder prediction 554 593 - -
Aev06g1042 710 Gene3D - 295 367 - -
Aev06g1042 710 ProSiteProfiles PB1 domain profile. 591 674 IPR000270 GO:0005515
Aev06g1042 710 MobiDBLite consensus disorder prediction 682 710 - -
Aev06g1042 710 MobiDBLite consensus disorder prediction 688 710 - -
Aev06g1042 710 MobiDBLite consensus disorder prediction 579 593 - -
Aev06g1042 710 CDD B3_DNA 132 234 IPR003340 GO:0003677
Aev06g1042 710 SMART B3_2 134 236 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1042 Aev-Chr6 6990299 6994334 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1042 21 678 B3 DNA Binding Superfamily AT4G23980 57.508 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev06g1042 AUX_IAA 4.7e-11 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1042 K14486 - gmx:100790981 995.727