Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1040 ATGGAGCATCAACCACCGCCCACTGCCCTCCTCCAAGACGCACCCACGCCCCACAAACCCGACAACCGCCCAGTAGGCGGCACGCGCCACCCTCTCTACCGCGGCGTGCGGAAGCGCCGCTGGGGGAAATGGGTCTCGGAGATTCGGGAGCCGCGCAAGAAATCCCGCATATGGCTCGGCTCTTTTCCGGTGCCGGAGATGGCTGCCAAGGCCTACGACGTCGCTGCCTTCTGCCTCAAAGGCCGCAAGGCGCAGCTCAACTTTCCCGATGAGGTGGGCCACCTTCCGCCGCTCCCTTCCACCTCCTCCGCTAGGGAAATTCAGGCCGCTGCTGCTAAAGCCGCCGCTATGATGAAGGCCGCTGATTCTTCCGGAGGGAAGAGCGGCGGTGGGGACAATGTGTCCGACGACGGTGAAAGCGGCGGCGATGATGATGATTTCTGGGGGGAGATTGAGTTGCCGGAGCTGATGGACGGGGGCGAGTGTTGCTGGAGCTCCCCAAGTGGGTCATCGTGGAATTCCTCCGGCGACATGGCGGCGGCGTGGCCGGAGGTGGAGCAGCCCTTCACGGCGTGTCTATAA 582 0.6409 MEHQPPPTALLQDAPTPHKPDNRPVGGTRHPLYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPDEVGHLPPLPSTSSAREIQAAAAKAAAMMKAADSSGGKSGGGDNVSDDGESGGDDDDFWGEIELPELMDGGECCWSSPSGSSWNSSGDMAAAWPEVEQPFTACL* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1040 193 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Aev06g1040 193 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 20 193 - -
Aev06g1040 193 Gene3D AP2/ERF domain 32 90 IPR036955 GO:0003700|GO:0006355
Aev06g1040 193 MobiDBLite consensus disorder prediction 1 32 - -
Aev06g1040 193 MobiDBLite consensus disorder prediction 121 149 - -
Aev06g1040 193 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 20 193 - -
Aev06g1040 193 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Aev06g1040 193 PRINTS Ethylene responsive element binding protein signature 71 91 IPR001471 GO:0003700|GO:0006355
Aev06g1040 193 SUPERFAMILY DNA-binding domain 32 91 IPR016177 GO:0003677
Aev06g1040 193 Pfam AP2 domain 31 81 IPR001471 GO:0003700|GO:0006355
Aev06g1040 193 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Aev06g1040 193 CDD AP2 31 90 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1040 Aev-Chr6 6963307 6963888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1040 28 193 AP2-EREBP Transcription Factor Family AT1G01250 59.302 4.27e-51 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev06g1040 AP2 2.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1040 K09286 - gmx:100802036 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1040 06 6963307 6963888 Aev02g0174 02 1237332 1237877 PCT