Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1039 ATGAAGATAGAGGTGGGGATAGGGCGCGTGGTGTGGGACGACGAGGATAAGGCCATGGTGGCGGCGGTTATGGGAGCACGCGCTTTCGATTTCTTGGTGACGAACTCGGTGTCGAATGAGAGCCTCTTAATGGCCGTCGGGAGTGACGAGAGCCTCCAGAACAAGCTCTCCGATCTGGTGGACCGCCCCAACGTCGCTAATTTCAGCTGGAACTACGCGATTTTCTGGCAGCTCTCTCAGTCGAAATCCGGCGAGTGGGTTTTGGGGTGGGGTGACGGGTCCTGCAGAGAGCCCAACGAGGAGGAAGAAGAAGAAGGCTGCGTGAGAGGGATTCTGAGCCTCCGAATCGAGGAGGAGATGCAGCAGCAGAGGATGAGGAAGAGGGTTCTGCAGAAGCTGCACACCACTTTCGGCGGCTCCGATGAGGACAATTACGCTTTTGGCCTCGACCGCGTAACTGACACGGAGATGTTCTTTCTGGCTTCCATGTACTTCTCGTTCCCACGCGGCCACGGTGGGCCAGGTAAGTGCTTCGCGTCCGGGAAGCACATGTGGCTCTCGGACGCATTGAAATCTGCATCTGATTACTGCGTGAGATCTTTCTTGGCTAAATCCGCTGGGTTTCAGACTATTGTTTTGGTGCCTACTGATTTGGGGGTCTTGGAGTTGGGTTCCGTGAGGCCGCTTCCAGAGAATTTTGAGCTCTTGCAGGCCATCAAATCTGTGTTTTCCTCTTCGCCCTACTCCAGAGCCAAGCCTCTTTTGCCGTTGCCATTGCCTGCTGTGAGTGATAAGAGGGATGACAATGCTATTTTCCCTGCTGCTGGTTTGGCTATTGGGGACCATAACAACAACAACAACAGCAGCAGCAAGAAGGTTGAATCGGTTCCTAAGGTTTTTGGAAACCCTGTGAATTCGGGTAGGACTCATTTCAGGGAGAAGCTTGCTGTTAGGAAGATGGAGGAGAGGCCTTGGGCAGGCCATGGCCCCAATGGGACTAGTACCATTAACTTTCCCAATGGTGCTAGGAATGGTGTTCATGCTTCGTCAGGTTGGGGAGGGAATCATCATCATCATCATCATCAAGGTGGTGGTGGTGTTTTGAGGCAGCCTGTCCCAGCTGAGATTTTCGCTCCTAGGCCCACCGCTGGCAATGTTCCAGAGCTGGCAGCTAATGGTGGTATGAGGCAGGATTTCAGGCTTAACAGTTTTCAACCTCAAAGGCAGGTGCAAATGCAGATTGATTTCTCGGGAGCCACTTCAAGGCCTTCTGTGAGGCCTATGGTTGCCGAAGCGGAACTCTCTGATGTTGAGGCCCCTTGCAAGGAGGAGCAACCTGGCACTGCCGATGAGAGGAGGCCCCGTAAGCGAGGGCGGAAGCCTGCTAATGGGAGGGAGGAACCCCTCAATCACGTGGAAGCGGAGAGGCAGAGGCGTGAGAAGCTCAACCAGCGGTTCTATGCATTGCGGTCTGTGGTGCCAAACATCTCCAAGATGGACAAGGCATCGTTGCTGGGTGATGCCATTGCCTACATCAATGAGCTTCAGGCAAAGCTGAAGATGATGGAGTCCGAGAGGGGGAGCAGCTCGAGGGATGGGTTGGCGCTGGAGGGCAGGCAGAGAGCAGAAGAGCACCATCAGGGTGGAGCTGCTGATGTGGACATCCAAGCTGCACAAGATGAGGTCATTGTTAGGGTGAGCTGCCCCATTGATGCTCACCCAGTTTCAAGAGTGATCCAAACATTCAAAGATGCAGAAATCAGTGTGGTAGAGTCGAAGCTCGCAGCTGCCAATGACACTGTCTTTCACACCTTTGTAATTAAGTCCCAAGGATCTGAACAGCTCACAAAGGACAAGTTGGTTGCAGCCCTTTCCAGAGAATCCAATTCCTTGCAGCAATTGTCATCATCGGTTGGATAG 1920 0.5344 MKIEVGIGRVVWDDEDKAMVAAVMGARAFDFLVTNSVSNESLLMAVGSDESLQNKLSDLVDRPNVANFSWNYAIFWQLSQSKSGEWVLGWGDGSCREPNEEEEEEGCVRGILSLRIEEEMQQQRMRKRVLQKLHTTFGGSDEDNYAFGLDRVTDTEMFFLASMYFSFPRGHGGPGKCFASGKHMWLSDALKSASDYCVRSFLAKSAGFQTIVLVPTDLGVLELGSVRPLPENFELLQAIKSVFSSSPYSRAKPLLPLPLPAVSDKRDDNAIFPAAGLAIGDHNNNNNSSSKKVESVPKVFGNPVNSGRTHFREKLAVRKMEERPWAGHGPNGTSTINFPNGARNGVHASSGWGGNHHHHHHQGGGGVLRQPVPAEIFAPRPTAGNVPELAANGGMRQDFRLNSFQPQRQVQMQIDFSGATSRPSVRPMVAEAELSDVEAPCKEEQPGTADERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAIAYINELQAKLKMMESERGSSSRDGLALEGRQRAEEHHQGGAADVDIQAAQDEVIVRVSCPIDAHPVSRVIQTFKDAEISVVESKLAAANDTVFHTFVIKSQGSEQLTKDKLVAALSRESNSLQQLSSSVG* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1039 639 SMART finulus 472 521 IPR011598 GO:0046983
Aev06g1039 639 Coils Coil 512 532 - -
Aev06g1039 639 CDD bHLH_AtAIB_like 463 526 - -
Aev06g1039 639 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 466 515 IPR011598 GO:0046983
Aev06g1039 639 MobiDBLite consensus disorder prediction 434 477 - -
Aev06g1039 639 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 469 532 IPR036638 GO:0046983
Aev06g1039 639 Pfam Helix-loop-helix DNA-binding domain 470 516 IPR011598 GO:0046983
Aev06g1039 639 MobiDBLite consensus disorder prediction 523 550 - -
Aev06g1039 639 Gene3D - 459 531 IPR036638 GO:0046983
Aev06g1039 639 MobiDBLite consensus disorder prediction 282 307 - -
Aev06g1039 639 PANTHER MYC 1 629 IPR045084 GO:0003700|GO:0006355
Aev06g1039 639 PANTHER ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR 1 629 - -
Aev06g1039 639 MobiDBLite consensus disorder prediction 523 551 - -
Aev06g1039 639 MobiDBLite consensus disorder prediction 436 477 - -
Aev06g1039 639 MobiDBLite consensus disorder prediction 348 369 - -
Aev06g1039 639 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 52 243 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1039 Aev-Chr6 6947828 6949747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1039 5 637 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 51.306 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev06g1039 bHLH-MYC_N 1.3e-53 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1039 - - adu:107491937 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1039 06 6947828 6949747 Aev02g0175 02 1253731 1255629 PCT