Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1036 ATGGACTCCATTTCCGATGGGCGGTGCAAGCGCAGCGCCGGCCCCAAGTGGCGGTGCTCCGAGGCAGCGTCGCCGGGGAAATCATACTGCGACAAGCACTTGCAGCAGCGTGCGAATCAAACCCAGAAACGCAGAATTCAGATGCAGAAACACAGGTCTGGCAAGACCACGGCGAGGACTCGAACAATCGCCGATGAACTCAGTGACGGATCCGAATTGGAAGCATCGGAATCTGAATTGATTGAGAATTCCGCCAGAAATCGAAAACCGGAGAAGAAGAAGATTAAGAAACTGAATGATCAAGACAATGATGATGTGTGCTCTTACAAGGGACTGATGAGCGTCTACCCTACCGCCAAGAAGAAGGGTTCACGACCCAAACATGGACTTGAAGATGCTAAACAAATGGGTTTATCCAGCAGAAGCAAGGAGAGTGGAAGTTTGATGTGTCATCAGTGCCAGCGGAATGATAAGAGTGGTGTTGTCAATTGCTTAGATTGCAACAGAAAACGTTATTGTTATGAATGCATCGAAAAGTGGTACCCAGGGAAAAGCCGAGAGGATGTTGAGAAATCATGTCCATTTTGTTCTGGCAATTGCAACTGCAAAGCTTGCTTGCGGGAGGTTCCAGAGTTTAGGCCTCGAGAAGTTAGTCCCAGCATCAGATTACACCGAGTGCTGTACTTACTCTGTAAAGCGCTGCCAGTTCTGAGGCATATTCACAAGGAGCAGAGCTTAGAATTAGAAGTAGAAGCCAAAATAAAGGGTACTCAACTGCAAGAAATTGACGTAGCCAGAACAAAGCTTGACATAAGTGAGCGCTTATACTGTGACAATTGCAACACATCCATAATTGGATTTTACAGAAGCTGCCCCAACCCCAGTTGCTCTTATGATCTATGTCTCACGTGCTGTAAAGAGCTAAGAGAGGGTTGCCAACCTGGAGGCACAGAAGCTGAAACATCCCATGAACAATTTGCAGAGAGAGCTTGTACTCATGATTCAACAAGAACTCAGGGTAAGGAACAGAGTAAAAGATATGGGTGGGAGGGCCAGAATGCACCTACTAATTTTGATTTTCAAGTTGATTTGTCAACTCCCTTCCCTGAATGGAAAGCTAATAGTGATGGTAACATTCCATGTCCTCCGAAACAGCGAGGAGGCTGTGGTACTGCACTGCTAGAACTGAAGCGCGTTTTCAAAGCCAATTGGATTGTGAAACTGTTAAAGAATGCTGAGGATCTCACAAGAAACTACATGCCAGTGGATGTTGATATCACCGAAAGGTGTACTCTATGTGAGAAAAATACCATTGAAGGAAAAACCAATCTCGAAGCTCGGAGGGCAGCATTCAGGGATGACAGCAATGATAATTTTATATATAGCCCAAATGGCCTTGACATTCATGATGATGATATTGAGCATTTCCAGAGGCATTGGGGGAGGGGAGAACCTGTGATTGTGAGAAATATTCTTGATAAGACAACAGGTCTTAGCTGGGAGCCGATGGTTATGTGGAGGGCTTTCAGAGAAACAGGTTCCAAAGTGAAGTTCAAAGAGGAAACACAAAGTGTGAATGCCATTGATTGCTTGGATTGGTGTGGGGTTGAGATCAATATTCACCAATTTTTCCGTGGCTACCTAGCTGGCCGAATGCATCAAGGTGGGTGGCCCGAAATGTTGAAATTGAAAGATTGGCCTTCATCAACTACTTTTGAAGAGCGTTTGCCCAGGCATGGCATTGAGTTCCTTAAGTCACTCCCCTATAGGGACTATACTGATCCGAAATCAGGTCTTTTGAATTTTGCCTCTAAACTTCCTGATGGCTTGCTGAAACCAGATTTGGGACCCAAAACATATATTGCTTATGGATTTTCTGAAGAGCTTGGCCGAGGAGATTCTGTGACAAAGCTGCATTGTGATGTGTCTGATGCGGTCAATGTGCTGACCCACAAAACCAAGGTAAAGATTGCTCCCTGGCAGAGAGAAATCATAAAAGAGTTGCAGAAGAAATATGCTGAAGAAGACTCTCGGGAACTGTTTTGTGAAGCAGTACGAGATACTGATGAAAGATCTATATTGAAAGCATTGAACCATGATCCAGAAGCAGAGAAAGGAGTTAATAATATTTCACCAAGTAGCCAAGTGGATCAATGCATTTCATCTGTAGCTGAGCACATCAGTCAGAATTTAGAACCAAATAATCAATCTGCAAGTAGTAGCTCGGACTCAAGTAATATGAACAATAAGGAAGACAGAATGAAGATTGATTCTCAAGATGACAAGGTGTCTGGCGATCCTGTGTTAAGAGAGTCAAAACAAGTCCTGGGGGAAGATTCTTTGGAAACTGAAAATGGGGCTGAGGTTGCCCATGGTGGTGCTGTTTGGGACATCTTCCGTCGAGAAGACGTCCCTAAGCTAATTGAGTACTTAAGGAAGCACAAGAAGGAATTCCGTCATATAAAAAATCATCATGTAGATTCTGTTATACATCCTATTCACGATCAAACTCTGTTCTTAAATGAGAGGCATAAGAAGCAGCTGAAAAAGGAGTACAATATTGAACCATGGACTTTTGAGCAACACCTTGGTGAGGCTGTTTTTATTCCAGCAGGATGTCCTCATCAAGTGAGAAACAGACAATCGTGTATCAAGGTTGCACTTGATTTTGTTTCTCCGGAGAATGTTGGAGAATGTTTGCGACTAACTGAAGAGTTCCGTTTGCTTCCCAAAAACCACAGAGCCAAGGAGGACAAATTGGAGGTTAAAAAGATGACTCTTTATGCTGTAAGTATGGCTGTTAGAGAAGTCAAAGAACTAAAGAATATCGATTAG 2835 0.4374 MDSISDGRCKRSAGPKWRCSEAASPGKSYCDKHLQQRANQTQKRRIQMQKHRSGKTTARTRTIADELSDGSELEASESELIENSARNRKPEKKKIKKLNDQDNDDVCSYKGLMSVYPTAKKKGSRPKHGLEDAKQMGLSSRSKESGSLMCHQCQRNDKSGVVNCLDCNRKRYCYECIEKWYPGKSREDVEKSCPFCSGNCNCKACLREVPEFRPREVSPSIRLHRVLYLLCKALPVLRHIHKEQSLELEVEAKIKGTQLQEIDVARTKLDISERLYCDNCNTSIIGFYRSCPNPSCSYDLCLTCCKELREGCQPGGTEAETSHEQFAERACTHDSTRTQGKEQSKRYGWEGQNAPTNFDFQVDLSTPFPEWKANSDGNIPCPPKQRGGCGTALLELKRVFKANWIVKLLKNAEDLTRNYMPVDVDITERCTLCEKNTIEGKTNLEARRAAFRDDSNDNFIYSPNGLDIHDDDIEHFQRHWGRGEPVIVRNILDKTTGLSWEPMVMWRAFRETGSKVKFKEETQSVNAIDCLDWCGVEINIHQFFRGYLAGRMHQGGWPEMLKLKDWPSSTTFEERLPRHGIEFLKSLPYRDYTDPKSGLLNFASKLPDGLLKPDLGPKTYIAYGFSEELGRGDSVTKLHCDVSDAVNVLTHKTKVKIAPWQREIIKELQKKYAEEDSRELFCEAVRDTDERSILKALNHDPEAEKGVNNISPSSQVDQCISSVAEHISQNLEPNNQSASSSSDSSNMNNKEDRMKIDSQDDKVSGDPVLRESKQVLGEDSLETENGAEVAHGGAVWDIFRREDVPKLIEYLRKHKKEFRHIKNHHVDSVIHPIHDQTLFLNERHKKQLKKEYNIEPWTFEQHLGEAVFIPAGCPHQVRNRQSCIKVALDFVSPENVGECLRLTEEFRLLPKNHRAKEDKLEVKKMTLYAVSMAVREVKELKNID* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1036 944 Pfam JmjC domain, hydroxylase 793 890 IPR003347 -
Aev06g1036 944 ProSiteProfiles JmjC domain profile. 595 907 IPR003347 -
Aev06g1036 944 MobiDBLite consensus disorder prediction 79 97 - -
Aev06g1036 944 MobiDBLite consensus disorder prediction 1 15 - -
Aev06g1036 944 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 16 755 IPR045109 GO:0032454|GO:0033169
Aev06g1036 944 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 778 940 IPR045109 GO:0032454|GO:0033169
Aev06g1036 944 SUPERFAMILY Clavaminate synthase-like 472 936 - -
Aev06g1036 944 MobiDBLite consensus disorder prediction 730 747 - -
Aev06g1036 944 SMART cupin_9 576 907 IPR003347 -
Aev06g1036 944 MobiDBLite consensus disorder prediction 1 97 - -
Aev06g1036 944 Pfam WRC 6 43 IPR014977 -
Aev06g1036 944 Gene3D Cupin 465 916 - -
Aev06g1036 944 ProSiteProfiles WRC domain profile. 3 53 IPR014977 -
Aev06g1036 944 ProSiteProfiles Zinc finger RING-type profile. 150 197 IPR001841 -
Aev06g1036 944 MobiDBLite consensus disorder prediction 730 751 - -
Aev06g1036 944 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN-CONTAINING PROTEIN 16 755 - -
Aev06g1036 944 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN-CONTAINING PROTEIN 778 940 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1036 Aev-Chr6 6927691 6933138 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1036 7 45 GRF Transcription Factor Family AT2G06200 43.590 4.92e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aev06g1036 JmjC 2.8e-17 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1036 K15601 - mnt:21406261 1080.09