Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev06g1027 | ATGATAATTAAGCGCACTCTGAAACCTGGGATCCAGATCCTCAAACGCTGCAAGCTAGAAGAACCCAATTCCCAGCAGCACCACTCTTCCGCCATCAACAAGAAGCGCAAGCTCGATGAGTTTTGCTCTCTCCCCATTCCACTCGATGCCGGAAATTTGACCTGCGGTTCTGGATCTTGGTTCACTCGAGCACCGGATTGCGTTGATCATGTCCACTCAGATTCGAAGTCCACGGAGCTCAATGCTGCAGACACGACAGAGCCACTATACCGTGTCTCTGAGCCAGCAACGCTTCTTCAACCTCCATTGCTGCGGTCATCGCGAGGTCGACCCAGGGTTCTTCCATCCAGATTCAATGACTCTGTTCTTCACACCTGGAAAAATAGTGGTGGAGGATCAATCAAAATGGAGAACAAATACTCCCGGTATGAACGTGATACTATTGCTTTTGAAGATACTGATATGGCATTTGCAAAACAGGGGAAGATGAATAAACGCGTGGAAGCAGAATTGGGTAGCTTAGGTTTCGGTGATTTGGACTGCGACAGGAAGTATGTTAATTCGTTCAAGACTGTTAAAACTAGTCTTAATGGGAGCCGTTCGTTACTGGTTAAAACAGAGAGTGATGGTGCTTCTGGACTTGGTTTTGAGGCTGTGACCCAAAAGCCTAATGGGAATGGAAGGAAGAGGAAAGACATGTATAAACCGGATGATTTTGCTTTGGGTGATATCGTTTGGGCGAAATGCGGGAAGCGGTATCCTGCTTGGCCTGCTGTGGTGATCGATCCCATCTTACAAGCTCCCAAGTCAGTCCTCAGTTGCTGTGTTCCTGGTGCAATTTGTGTTATGTTCTTTGGTTATTCGAAAAATGGAAAGCAAAGGGATTATGCATGGGCGAAGCAGGGAATGCTATTCCCTTTCTTGGAATTCATGGATAGGTTCCAGGGGCAGACCCAATTGTACAAGAGCAAGCCAAGTGATTTCCAGATGGCAATGGAGGAAGCAATGTTGGTGGAAGATGGAATTCTGGACACACACTTGGGACCTGAGCAAATTAGCAGCAACGTTGAAGCTAATCCCAGTAGGCATATGGAGGGTACGGGTTCCTTTGCTGAGCAGGACCATTACCACCAGGATCAGGATGCTATATCTTGTGCTGGCTGCGGTTTGATGTTGCTGCGTAAAATCAAGAAGAAGATTAAGGATTCAAGCTGCGCACCTCTACTTTATTGTAAACAGTGTGTCAAGTTACAAAAATCTAAACAATATTGTGGAATTTGTAAAAAGATTTGGCACCATTCAGATGGTGGAAATTGGGTATGCTGTGATGGTTGTAATGTTTGGGTGCATGCAGAGTGTGATAAAATTTCCAGCAAACTTCTTAAGGATTTGGAAAATATGGATTACTACTGTCCAGACTGCAAGGGGAAACGTGATTGTAAATTATCTGTATCTGCATCACAAATATACAAGTCAAAAAATAAACCAGCAGAGAAAAGTAAAAAACCTGTGATACCTGAAGAGCTTGCAGTGGTGTGCAATGGCATGGAAGGGATTTACATTCCAAAACTTCATTTAATTATGTGCAAGTGCAAATCCTGCGGTTCAAGAAAGCATGCACTGCCTGAATGGGAGCGACATGCAGGTTGTAGAGCCAAAAAATGGAAACTTAGTGTGAAAGTGGAAAGCACAATGCTACCACTAATAGAATGGATCACCGAACACAATTCACGAGCTGGAATAACCCAGCACTTAGATAAGCAGATGTTAATTTCCTTGTTGCAAGAGGATTATGAGCCCATTGATGCGAAATGGACAACAGAAAGATGTGCCATTTGTAGATGGGTTGAAGATTGGGAAGATAACAAAATTATTATCTGTAACAGGTGCCAAATTGCAGTCCATCAAGAGTGCTATGGAGCAAATAATGTTCAGGATTTTACTTCTTGGGTTTGTAGAGTCTGTGAAACTCCTGATATTGAGAGAGAATGTTGCCTCTGTCCAGTAAAAGGTGGTGCCCTAAAGCCAACTGATGTCGACACGTTGTGGGTTCACGTAACATGTGCTTGGTTTCGGCCTGAAGTTCTTTTCAAAAACCACGAGGCAATGGAACCTGCTTCTGGAATCCTTAGAATTCCTCCTGATTTGTTTTTGAGGACTTGCGTGATCTGTAAACAAAGCCATGGTTCGTGCACAAGCTGCTGCAAGTGTGCTACTTATTTTCATGTGATGTGCGCATCAAGAATGGGATATAGCATGGAATTTCACTCTGTTGAGAAGAATGGTAAACAAAAAACAAAGAAGCTAATATATTGCAAATTTCACAGGGTTCCAAAGCCAGATTCGGTACTGGTTGTACATACACCACAGGGAGTATTCTCTGCCGGAACATCGCTTCAAAATCATGAGGGACGCTTCAGGGGATCAAAGCTGGTTTCATCCAATAATGTAGAACTCCTTGAATCTTCAACCTCTCAAAGTTATGATGAGGTTGAGCCACTCTCTGCTGCAAGGTGTCGCGTGTACATAAGGTCTTCTAAGAAGAGGGATAATGTGCCAATAATGCACTTGCTGGGGGGGCCAAACCTTCATTCTTTAAGTGCTATAAATGAATTGACCAGCAATGAGGATGTTGAAGTATTTTCTTCTCTCAAAGAACGTCTTGACCATTTACAGAAAACTGAAAGACGTAGAGTTTGCTTAGGAAAATCTGGTATCCATGGATGGGGCCTTTTTGCTCGTAGAGAATTACACGAAGGAGAAATGGTTGTGGAGTATCGTGGTGAGCAAGTAAGGCGTAATGTTGCTGATCTGAGGGAAGCAAAGTATCATCGAGAAGGCAAAGATTGTTATCTGTTCAAGATTAGTGAGGAAGTAGTAATCGATGCAACCGAAAAGGGCAATATTGCGCGTTTGATTAACCATTGTTGCAAGCCAAACTGCTATGCAAGAATAATGTCTTTGAATGATAAGGAGAGCCGGATTGTCCTTATTGCCAAGACCAATGTTGCTGCTGGTGAAGAATTAACGTATGACTACTTGTTTGATCCAGATGAGCGGGATGAACTGAAAGTTCCCTGCCGATGTAAAGCCCCCAATTGTAGGAGATTCATGAACTAG | 3120 | 0.4343 | MIIKRTLKPGIQILKRCKLEEPNSQQHHSSAINKKRKLDEFCSLPIPLDAGNLTCGSGSWFTRAPDCVDHVHSDSKSTELNAADTTEPLYRVSEPATLLQPPLLRSSRGRPRVLPSRFNDSVLHTWKNSGGGSIKMENKYSRYERDTIAFEDTDMAFAKQGKMNKRVEAELGSLGFGDLDCDRKYVNSFKTVKTSLNGSRSLLVKTESDGASGLGFEAVTQKPNGNGRKRKDMYKPDDFALGDIVWAKCGKRYPAWPAVVIDPILQAPKSVLSCCVPGAICVMFFGYSKNGKQRDYAWAKQGMLFPFLEFMDRFQGQTQLYKSKPSDFQMAMEEAMLVEDGILDTHLGPEQISSNVEANPSRHMEGTGSFAEQDHYHQDQDAISCAGCGLMLLRKIKKKIKDSSCAPLLYCKQCVKLQKSKQYCGICKKIWHHSDGGNWVCCDGCNVWVHAECDKISSKLLKDLENMDYYCPDCKGKRDCKLSVSASQIYKSKNKPAEKSKKPVIPEELAVVCNGMEGIYIPKLHLIMCKCKSCGSRKHALPEWERHAGCRAKKWKLSVKVESTMLPLIEWITEHNSRAGITQHLDKQMLISLLQEDYEPIDAKWTTERCAICRWVEDWEDNKIIICNRCQIAVHQECYGANNVQDFTSWVCRVCETPDIERECCLCPVKGGALKPTDVDTLWVHVTCAWFRPEVLFKNHEAMEPASGILRIPPDLFLRTCVICKQSHGSCTSCCKCATYFHVMCASRMGYSMEFHSVEKNGKQKTKKLIYCKFHRVPKPDSVLVVHTPQGVFSAGTSLQNHEGRFRGSKLVSSNNVELLESSTSQSYDEVEPLSAARCRVYIRSSKKRDNVPIMHLLGGPNLHSLSAINELTSNEDVEVFSSLKERLDHLQKTERRRVCLGKSGIHGWGLFARRELHEGEMVVEYRGEQVRRNVADLREAKYHREGKDCYLFKISEEVVIDATEKGNIARLINHCCKPNCYARIMSLNDKESRIVLIAKTNVAAGEELTYDYLFDPDERDELKVPCRCKAPNCRRFMN* | 1040 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev06g1027 | 1039 | Gene3D | - | 231 | 340 | - | - | |
| Aev06g1027 | 1039 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 599 | 658 | IPR013083 | - | |
| Aev06g1027 | 1039 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE | 1 | 1039 | - | - | |
| Aev06g1027 | 1039 | Pfam | PHD-finger | 622 | 656 | - | - | |
| Aev06g1027 | 1039 | ProSiteProfiles | PWWP domain profile. | 241 | 310 | IPR000313 | - | |
| Aev06g1027 | 1039 | Gene3D | SET domain | 868 | 1039 | IPR046341 | - | |
| Aev06g1027 | 1039 | Pfam | SET domain | 908 | 1013 | IPR001214 | GO:0005515 | |
| Aev06g1027 | 1039 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 661 | 776 | IPR034732 | - | |
| Aev06g1027 | 1039 | ProSiteProfiles | Zinc finger PHD-type profile. | 421 | 477 | IPR019787 | - | |
| Aev06g1027 | 1039 | Pfam | PHD-zinc-finger like domain | 663 | 775 | - | - | |
| Aev06g1027 | 1039 | SMART | PHD_3 | 609 | 656 | IPR001965 | - | |
| Aev06g1027 | 1039 | SMART | PHD_3 | 423 | 475 | IPR001965 | - | |
| Aev06g1027 | 1039 | SMART | PHD_3 | 720 | 776 | IPR001965 | - | |
| Aev06g1027 | 1039 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 659 | 777 | IPR013083 | - | |
| Aev06g1027 | 1039 | ProSiteProfiles | Zinc finger PHD-type profile. | 607 | 658 | IPR019787 | - | |
| Aev06g1027 | 1039 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 1 | 1039 | IPR025780 | - | |
| Aev06g1027 | 1039 | Pfam | PWWP domain | 242 | 336 | IPR000313 | - | |
| Aev06g1027 | 1039 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 412 | 481 | IPR013083 | - | |
| Aev06g1027 | 1039 | CDD | PHD_ATX3_4_5_like | 609 | 655 | IPR042011 | - | |
| Aev06g1027 | 1039 | ProSiteProfiles | SET domain profile. | 897 | 1014 | IPR001214 | GO:0005515 | |
| Aev06g1027 | 1039 | SMART | PWWP_4 | 239 | 308 | IPR000313 | - | |
| Aev06g1027 | 1039 | CDD | SET_SETD1-like | 886 | 1035 | - | - | |
| Aev06g1027 | 1039 | ProSitePatterns | Zinc finger PHD-type signature. | 610 | 655 | IPR019786 | - | |
| Aev06g1027 | 1039 | SMART | PostSET_3 | 1023 | 1039 | IPR003616 | - | |
| Aev06g1027 | 1039 | SUPERFAMILY | SET domain | 891 | 1035 | IPR046341 | - | |
| Aev06g1027 | 1039 | SMART | set_7 | 897 | 1020 | IPR001214 | GO:0005515 | |
| Aev06g1027 | 1039 | SUPERFAMILY | FYVE/PHD zinc finger | 607 | 672 | IPR011011 | - | |
| Aev06g1027 | 1039 | SUPERFAMILY | Tudor/PWWP/MBT | 232 | 347 | - | - | |
| Aev06g1027 | 1039 | Pfam | PHD-finger | 423 | 476 | IPR019787 | - | |
| Aev06g1027 | 1039 | PANTHER | PHD FINGER PROTEINS | 1 | 1039 | - | - | |
| Aev06g1027 | 1039 | ProSiteProfiles | Post-SET domain profile. | 1023 | 1039 | IPR003616 | - | |
| Aev06g1027 | 1039 | SUPERFAMILY | FYVE/PHD zinc finger | 421 | 482 | IPR011011 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aev06g1027 | Aev-Chr6 | 6872592 | 6878753 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aev06g1027 | 610 | 762 | C2H2 Transcription Factor Family | AT3G14740 | 35.185 | 6.64e-20 | 90.9 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | PHD | Aev06g1027 | zf-HC5HC2H_2 | 1.3e-28 | CL0390 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev06g1027 | - | - | gmx:100793624 | 1376.3 |