Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1026 ATGGAAATGGATCACAGCATCAACGGCAACGTCAACATGTACAACCTCTTCGTGAAGCACTTGGACGGGAAAACCCTAACCCTAGTATTCCCCTCCCCGATCCTCTTCGCGAACTCTATCAAGGACCGCCTCTTCGATCTCACCGGCATCCCGCCGCAGCACCAGCGCCTCGTCACGGGCTGCCGCCACCTCAGCGACGACGAAGGATCCGCCATCGCGTGCCCGCCGGAGGGTGGAAACATCTTCCCCACGGTGCGGCTCCTTCTGCGGCTGAAAGGAGGAAAGGGAGGGTTCGGGTCGCTGTTGAGAGGTGCGGCGACAAAGGCAGGGCAGAAGAAGACGGACAACTTCGACGCGTGCAGGGACATGAGTGGTCGGCGGCTGAGGCACGTCAACGCCGAGAAGAAGCTGGAGGAGTGGAAGGCCGCCGAGGAGGAGCGGAGGCTGGAGAAGGTGGCGGAGGAGTTTCTGAAGAAGCAGATGAAGAAGGGTAAGAAGGGAGCGGGTGATGGAGAGGCACACAAGTATGTCGCAAAGTATAGAGAAGAGTCTGAGCGTTGTGTCGCTGAGGTTGCAGAGTCTGTGAAAGAGGCTTTGATGTCTCTCAATGGTAAGAGAAAGGGTTCTGAAGCTGCACACGATAGAGCTGATACCAAGAAGTTGAAGATTTGGATGGGAAAGAGGAAAGTAAATGAAAGTGACAGCGATAATTCTGATGAGAGTGATGATGAAAGGGAAAATCAGAAATCCATTGTGTTGAATAGTCAGGATGAGTCAGACTCAAATAAGGCCGAAGGCAGTTCGGGTTCTGTTACTGGTCAGAAACAGGATGGAGACTCTTCCGGTGCAGGCTCCTGTGAAAGTGGATCTGAAGAGGAGAAAGAAGCTCTAATAGAAGGCAAAGTGGAAACTGTTGGATCCCCAAATGGTGAAACTGATCAGGCTAAAATTAGTGATGCCGGTGAGATGTTGGAGGCTACTGCTATGCCTTGTTCAGAGTCAGTAGTTTCTGGATTTAGTGCCAAAGATAATGGATCTCAGGATTGCGATGGAACTGTGTCCGACAAGCATGGAGCTGTTAGCCAAGCCTCAGATATTGCAAGCTCAGAGAATGGGGCTGCTGCAAGCAAATTTAATGATATGGAGATTGATGGATCTCTTGACCATAAAGCATCAGTCCATGAAGAAAGCTCACCTAGCACTAGTGTTCCGGCACTGGAGGAGCCTCTGAGTTTTGATGCTTTTAATTCAGCTGCAGAGCTTGAGGTTCTTGGCATGGAAAGGTTAAAATCTGAACTGCAATCACGTGGGTTAAAATGTGGAGGCACTTTGCAGGAACGTGCAGCCAGGCTTTTTCTTTTGAAGTCGACTCCGCTCGATAAACTTCCGAAGAAGTTGCTTGCGAAGAAATGA 1413 0.5067 MEMDHSINGNVNMYNLFVKHLDGKTLTLVFPSPILFANSIKDRLFDLTGIPPQHQRLVTGCRHLSDDEGSAIACPPEGGNIFPTVRLLLRLKGGKGGFGSLLRGAATKAGQKKTDNFDACRDMSGRRLRHVNAEKKLEEWKAAEEERRLEKVAEEFLKKQMKKGKKGAGDGEAHKYVAKYREESERCVAEVAESVKEALMSLNGKRKGSEAAHDRADTKKLKIWMGKRKVNESDSDNSDESDDERENQKSIVLNSQDESDSNKAEGSSGSVTGQKQDGDSSGAGSCESGSEEEKEALIEGKVETVGSPNGETDQAKISDAGEMLEATAMPCSESVVSGFSAKDNGSQDCDGTVSDKHGAVSQASDIASSENGAAASKFNDMEIDGSLDHKASVHEESSPSTSVPALEEPLSFDAFNSAAELEVLGMERLKSELQSRGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAKK* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1026 470 Gene3D - 12 99 - -
Aev06g1026 470 PANTHER REPLICATION STRESS RESPONSE REGULATOR SDE2 13 469 - -
Aev06g1026 470 PANTHER SPLICING FACTOR SF3A-RELATED 13 469 - -
Aev06g1026 470 MobiDBLite consensus disorder prediction 252 287 - -
Aev06g1026 470 MobiDBLite consensus disorder prediction 223 321 - -
Aev06g1026 470 Pfam Replication stress response SDE2 C-terminal 396 469 - -
Aev06g1026 470 MobiDBLite consensus disorder prediction 336 405 - -
Aev06g1026 470 SUPERFAMILY Ubiquitin-like 12 69 IPR029071 -
Aev06g1026 470 MobiDBLite consensus disorder prediction 357 375 - -
Aev06g1026 470 Coils Coil 135 155 - -
Aev06g1026 470 Pfam Silencing defective 2 N-terminal ubiquitin domain 15 163 IPR024974 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1026 Aev-Chr6 6869464 6871672 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1026 403 469 C2H2 Transcription Factor Family AT5G06160 46.269 1.81e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1026 K25059 - gmx:100781694 504.212