Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1024 ATGAACACAAAGGGAACTAAATTTGTGAGGTTTGAGGACTGGAGATCAGAATCATCTTTCAGTGTACAGCAGGAAGATTCTGTTAATGGTGGATACAATAAGAGAAAAGTCATACCAAGTGTTGGTGCTGTTTTGAAGAGTATTGGAAGGAGACTTGAGAGCGGATCACACAAGTTCAAGAAACTGAGGAAACCTTCTTCTACTGTCCATCCTGTGAGTAGTGGACAAGCAAAAGAAGTGGCTTCTTCTAGGAGCAAAATTCTTGATCCACAAGGATCATTCCTTCAGAAATGGAACAAGATTTTTGTGATCACTTGTGTGATGGCAGTGTCTGTGGACCCTCTCTTCTTTTACATTCCAGTGATAAGGGGCAAAGACAAATGTCTTGATTTGGATGGAACACTAAGGATCACTGCTAGTGTTCTTCGCACATTCTTCGATCTCTTCTACATTCTTCGCATATTCTTTCAGTTTCGGACAGGGTTCATTGCCCCTTCTTCGCGTGTTTTTGGGAGGGGTGAGCTCATTGATGATCCTGCAGCTATAGCAAAAAGATACTTAACTTCGAATTTCATCATTGACATCCTATCAATCATTCCACTTCCACAGGTGCTCGTTTTGGCTGTGATTCCAAGCCTGAAAAGCTCAGTTCCATTTTTAGCAAAGGATTTGTTGAAGTATATTGTAATAATCCAGTACGTGCCAAGACTTCTGAGGATCTGGCCATTATTCAAAGAAGTAACCAGAACTTCTGGTATATTGACTGAGACAGCTTGGGCTGGAGCTGTTTATAATCTTTTTCTTTATATGCTAGCAAGTCATGTGGTTGGATCTATCTGGTATCTGCTTTCAATAGAATCAGAGGTGCGATGCTGGCGCAAAGCAATGAAGAACGCTTCTCTCTTTCATGAGTCATACTTGGGTTGTGGATTCCGCAATCAAACTGTCATGTCACTTCTCAATAGTAGTTGCCCTATCATTGACCCTGATGATATCCAAAACCAGACAGACTTCAATTTTGGAATATTATTTGATGCTTTAGATTCAGGTGTGGTAGATTCAACCACAGATTTTCCTCAGAAATTCTTCTACTGCTTTTGGTGGGGTTTGCGCAATTTGAGTTCTCTTGGACAGAATCTCAAGACGAGTACTTATATTGTGGAGATAGCCTTTGCCATCTTCATTGCCGTTTTTGGATTGGTTTTATTCGCATTGCTTATTGGAAACATGCAGAAATATTTGCAATCTACTACTGTTAGAGTTGAAGAGATGAGAGTCAAGAGGCGCGACGCAGAACGGTGGATGTCCCACCGTATGCTACCTGAGAAGTTGAAGGAAAGAGTAAGACGGTATGAGCAATACAAATGGCAAGAAAATAGGGGAGTTGAAGAAGAGGTTTTGATTCGCACCCTCCCTAAAGATCTCAGAAGGGACATAAAGCGCCATCTCTGTTTGGCTTTGGTTAAGAAAGTGCCAATGTTTGAAAAGATGGATGAGCAGTTATTGGATGCAATGTGTGATAGACTGAAGCCAGTGCTTTATACAGAGAAGAGCTACATTGTTCGTGAAGGTGATCCTGTTGATGAGATGTTGTTCGTCATGCGTGGAAACCTTGCTACCATGACAACAAATGGTGGAAGGACTGGTTTCTTCAATTCCTTGCTTCTCAAGGCTGGTGACTTCTGTGGAGAGGAGCTTCTAACATGGGCCTTGGATCCTAACTCCTCCACAAATCTTCCAACTTCAACTAGAACAGTTGAAACTATATCAGAAGTTGAAGCATTTGCTCTCATGGCTGATGACTTGAAGCTTGTTGCTTCCCAATTTCGACGCCTTCAGAGCAAACAGATCCAGCACACTTTCAGGTTCTATTCCATGCAATGGAAGACATGGGCTGCGTGTTTCATACAAGTAGCTTGGCGTCGGTACTGGAAAAAGAAGCTTGAGAGGTCATTGCTTGAATCAGAAGACAGGCTACAAGGTGGTTTTTCGAATGAGGATGGGTCCTCTCTAAGCCTTGGTGCAACCATTTACGCGTCTAGGTTCGCTGTCAATGCATTAAGAAACTTGAGAGAGAACAGCGAACGCAACAGAATGCCACAAAGATCACTTCCACTGCTACCTCAGAAGCCAGCTGAACCAGATTTCTCTGCTCAGAAACACTAG 2166 0.4247 MNTKGTKFVRFEDWRSESSFSVQQEDSVNGGYNKRKVIPSVGAVLKSIGRRLESGSHKFKKLRKPSSTVHPVSSGQAKEVASSRSKILDPQGSFLQKWNKIFVITCVMAVSVDPLFFYIPVIRGKDKCLDLDGTLRITASVLRTFFDLFYILRIFFQFRTGFIAPSSRVFGRGELIDDPAAIAKRYLTSNFIIDILSIIPLPQVLVLAVIPSLKSSVPFLAKDLLKYIVIIQYVPRLLRIWPLFKEVTRTSGILTETAWAGAVYNLFLYMLASHVVGSIWYLLSIESEVRCWRKAMKNASLFHESYLGCGFRNQTVMSLLNSSCPIIDPDDIQNQTDFNFGILFDALDSGVVDSTTDFPQKFFYCFWWGLRNLSSLGQNLKTSTYIVEIAFAIFIAVFGLVLFALLIGNMQKYLQSTTVRVEEMRVKRRDAERWMSHRMLPEKLKERVRRYEQYKWQENRGVEEEVLIRTLPKDLRRDIKRHLCLALVKKVPMFEKMDEQLLDAMCDRLKPVLYTEKSYIVREGDPVDEMLFVMRGNLATMTTNGGRTGFFNSLLLKAGDFCGEELLTWALDPNSSTNLPTSTRTVETISEVEAFALMADDLKLVASQFRRLQSKQIQHTFRFYSMQWKTWAACFIQVAWRRYWKKKLERSLLESEDRLQGGFSNEDGSSLSLGATIYASRFAVNALRNLRENSERNRMPQRSLPLLPQKPAEPDFSAQKH* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1024 721 ProSiteProfiles cAMP/cGMP binding motif profile. 493 577 IPR000595 -
Aev06g1024 721 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 7 719 - -
Aev06g1024 721 SUPERFAMILY Voltage-gated potassium channels 89 415 - -
Aev06g1024 721 MobiDBLite consensus disorder prediction 694 721 - -
Aev06g1024 721 Pfam Cyclic nucleotide-binding domain 513 603 IPR000595 -
Aev06g1024 721 Gene3D - 100 417 - -
Aev06g1024 721 SMART cnmp_10 493 624 IPR000595 -
Aev06g1024 721 Pfam Ion transport protein 98 421 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aev06g1024 721 Gene3D Jelly Rolls 491 611 IPR014710 -
Aev06g1024 721 Coils Coil 721 721 - -
Aev06g1024 721 SUPERFAMILY cAMP-binding domain-like 422 614 IPR018490 -
Aev06g1024 721 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 7 719 - -
Aev06g1024 721 CDD CAP_ED 493 624 IPR000595 -
Aev06g1024 721 Gene3D Helix hairpin bin 420 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1024 Aev-Chr6 6864545 6867615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1024 1 718 Ion Channels AT5G53130 64.276 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1024 K05391 - gmx:100797784 1134.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1024 06 6864545 6867615 Aev02g0185 02 1348451 1352770 PCT