LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev06g0982	ATGCATCCAAGGAAACACTTCCCTATATCTATTCAACTCCACTCCTCTCTATGGAAAATTTTGGCAGCTCTTCTAGTTGTATGTATCACAATGCGCAGCTTCTCAATGGGTAGTGCAACTGCTGCAACAGAATGTGGCTTGAATTTCACCAAATATCCTTACGTGGGATTTTCCGAGTGCGGGGATGTGCATGAGGACATCCACAGTTGGGGTTGGGATGGGTTCCCAGCCACCATGTGCTGCCGCAACGCCCTCACCTCTCTCTCCGATGCCTTGGCAGTCCAAGCTAACATCTCAGGGAACCTCTTCGTCTCCCAGAGCCAATGGCAGAACTGCACCAACATGTTCCATCCACAACAGGGGATGTCAATCGACTCATGCGGCTTCCACAGCTTCTATTATGGCAGCTTCAACTGCACCTCCTTCAGTATGCAGGATGTCCAGTCCATGCAGCAGTACCCAGATGCATTGAACAAATGCTCCCACTTCGATCAACCCTATGTTGAGTCTTGTGCAACCTGTACCGCCGCAATATTGAACTTCAGGGATGCTCTGTTTGGGAACAGGGGCAATGATACTGACAGAGCCATATGTGGGGTTGCTGCTCTTGTTGCTCTTGCAGCTGGGAAACCCGATGATCCATCTCTTGCTGATAAATTCTTGCGCTGCTTGCCCTATTCAGCGAAAAAATCCAAAAATTGGGCAAGTATGATGCTAATAACCGTGCCTCTAGTTGTGGCTGTTATGTTGGTGATGGCGCTAGCGGTGAAATATGTGTGGAGTAAGAAGAAGAGTGTTATGGCGGCTCAGTTGACGGATATTGCGTCGTGGTCTGGACTGTACTGCTTCACGAAAGGTGAAATCGAGAGGGCGATGAATTATGGTGATGAGAAGGTATGCCTTGGGCGTGGGAGTGCTGGCATAGTGTATCGGGGTGTTCTGCCGAGTGGTCAGCTTGTGGCGATCAAGCATTTGACGAAGAGCAATACTTGTGACTCCTTCACCAGAGAAGTTGAAGGACTTTCCAGGCTTCGTCATCCCAATTTGGTTTGCTTGTTTGGCTGTTGCATTGAGGGTGATCAGAGGCATTTGAAATGGGAAACAAGAGTTCGCATTCTGAGGGACTGTTCATTCGCACTCAAGTATCTCCACCATCATATAGAAGGTTGTGTTGTGCATAGAGATATAAAGCTGACGAACATACTTCTGAATGAGAAATACCAAGCGAAACTGTCGGATTTTGGGCTGGCAAGGATGATGGGGATGGAAGAGAGCAAGGTGTTCACTGATATAAGAGGAACCATAGGGTACATGGATCCAGAGTACATGAGCAACGCGAGGCTGACATGTGCGAGTGACGTGTACAGTTTCGGCATTGTGGCGCTGCAGATTCTGTCAGGACAGAAAGTGATAGAACTCGACCTTGATGCGAGGGACCAGCTGACTAGGAAGGCAAGAGATGTGAGCATGGGGAAGCGACCTCTCTCGGATTTTGAAGATCCGAGGCTGAATGGAGAAGTGAACAGGGCCGACTTTGAGGCCATATTGCACATTGCAGTGCTCTGTGTTGCCAAGCAGAGCAAGGGTCGTCCTACCATTGAGGTTGTCTTTGAAGAGTTGGACAAGTGTGCACGGAACTCAAAGCAAGAGAAAAGCCCATCAGCATCGACACCATCCACCGTTGGCTCCTCCAAATTGGTTTCTTCTTCTGGTTGA	1716	0.4889	MHPRKHFPISIQLHSSLWKILAALLVVCITMRSFSMGSATAATECGLNFTKYPYVGFSECGDVHEDIHSWGWDGFPATMCCRNALTSLSDALAVQANISGNLFVSQSQWQNCTNMFHPQQGMSIDSCGFHSFYYGSFNCTSFSMQDVQSMQQYPDALNKCSHFDQPYVESCATCTAAILNFRDALFGNRGNDTDRAICGVAALVALAAGKPDDPSLADKFLRCLPYSAKKSKNWASMMLITVPLVVAVMLVMALAVKYVWSKKKSVMAAQLTDIASWSGLYCFTKGEIERAMNYGDEKVCLGRGSAGIVYRGVLPSGQLVAIKHLTKSNTCDSFTREVEGLSRLRHPNLVCLFGCCIEGDQRHLKWETRVRILRDCSFALKYLHHHIEGCVVHRDIKLTNILLNEKYQAKLSDFGLARMMGMEESKVFTDIRGTIGYMDPEYMSNARLTCASDVYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSMGKRPLSDFEDPRLNGEVNRADFEAILHIAVLCVAKQSKGRPTIEVVFEELDKCARNSKQEKSPSASTPSTVGSSKLVSSSG*	572

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev06g0982	571	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 40	60	364	-	-
	Aev06g0982	571	MobiDBLite	consensus disorder prediction	545	571	-	-
	Aev06g0982	571	SMART	serkin_6	295	544	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev06g0982	571	PANTHER	OS01G0253100 PROTEIN	362	553	IPR045271	GO:0004714\|GO:0006468
	Aev06g0982	571	ProSiteProfiles	Protein kinase domain profile.	295	544	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev06g0982	571	MobiDBLite	consensus disorder prediction	549	571	-	-
	Aev06g0982	571	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 40	362	553	-	-
	Aev06g0982	571	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	391	403	IPR008271	GO:0004672\|GO:0006468
	Aev06g0982	571	PANTHER	OS01G0253100 PROTEIN	60	364	IPR045271	GO:0004714\|GO:0006468
	Aev06g0982	571	Pfam	SPARK	41	193	IPR043891	-
	Aev06g0982	571	SUPERFAMILY	Protein kinase-like (PK-like)	276	540	IPR011009	-
	Aev06g0982	571	Pfam	Protein kinase domain	299	367	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev06g0982	571	Pfam	Protein kinase domain	371	536	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev06g0982	571	Gene3D	Phosphorylase Kinase; domain 1	266	363	-	-
	Aev06g0982	571	Gene3D	Transferase(Phosphotransferase) domain 1	364	565	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev06g0982	Aev-Chr6	6638542	6641142	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev06g0982	242	567	Receptor kinase-like Gene Family	AT2G19230	34.831	6.64e-47	174

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_URK-2	Aev06g0982		Pkinase	2.8e-24	CL0016

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev06g0982	06	6638542	6641142	Aev02g0255	02	1851021	1853927	PCT