Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0965 ATGTTGAAGCTGTCTCGTATGCTACCTTCCAGATATCGGTTATTGGAAACGCTGTCGTTTAGGAAAGCTGATGCTGGGGACTGTATGCGGCAATGCCATGATTTGAACTCTTCAGCTGCGTTTTCCACTGCTACAGATAATAAATATTCTGCTAAAGGGTATACTTCAAATCGTATATTTGCTCCATATTCTGTTTACAAGGGCAAAGCTGCATTCTCTTTGAGCCCTTGTCTTCCAACTTTCACCAAGTTGGATTCTGGAGCTGTTGTAGTTGATCGTCGCGGTTCGATAATGATGATTTTCATGCATGCTATTGGGGAGCGCAAGTATGACTGGGAGAAAAAACAGAGATTTGCTCTCTCAGCAACTGAAGTTGGCTCTTTGATAACCATGGGGCCCCAAGATTCTTGTGAATTCTTTCATGACCCCTCTATGTTATCAAGTAATGCTGGGCAAGTTCGGAAGAGCTTATCAATTAAGCCGCATGCAAACGGCAGTGGCTACTTTGTGTCTTTGAATGTTGTCAACAACCTGTTAAATACAAAAGAATTCTTCAGTGTCCCGGTCACAACTGCTGAGTTTGCTGTGATGAAGACAGCTTGCAGTTTTGCATTGCCCCACATTATGGGTTGGGACCGCATTACTCATCAGCAGTCTAGTGGCATGATTGGCCTTCAATCGAAGGTTGACCCACAAGCTTTAGACTTGGAGTGGGATAAGTAA 723 0.4371 MLKLSRMLPSRYRLLETLSFRKADAGDCMRQCHDLNSSAAFSTATDNKYSAKGYTSNRIFAPYSVYKGKAAFSLSPCLPTFTKLDSGAVVVDRRGSIMMIFMHAIGERKYDWEKKQRFALSATEVGSLITMGPQDSCEFFHDPSMLSSNAGQVRKSLSIKPHANGSGYFVSLNVVNNLLNTKEFFSVPVTTAEFAVMKTACSFALPHIMGWDRITHQQSSGMIGLQSKVDPQALDLEWDK* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0965 240 SUPERFAMILY ssDNA-binding transcriptional regulator domain 56 217 IPR009044 GO:0003677|GO:0006355
Aev06g0965 240 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 1 240 IPR013742 GO:0003697|GO:0006355|GO:0006952
Aev06g0965 240 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 1 240 - -
Aev06g0965 240 Pfam Whirly transcription factor 65 199 IPR013742 GO:0003697|GO:0006355|GO:0006952
Aev06g0965 240 Gene3D Transcriptional Coactivator Pc4; Chain A 49 221 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0965 Aev-Chr6 6507064 6509294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0965 1 240 Whirly Transcription Factor Family AT1G71260 57.787 4.08e-93 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Aev06g0965 Whirly 3.4e-55 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0965 - - gmx:100817863 350.132