Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev06g0965 | ATGTTGAAGCTGTCTCGTATGCTACCTTCCAGATATCGGTTATTGGAAACGCTGTCGTTTAGGAAAGCTGATGCTGGGGACTGTATGCGGCAATGCCATGATTTGAACTCTTCAGCTGCGTTTTCCACTGCTACAGATAATAAATATTCTGCTAAAGGGTATACTTCAAATCGTATATTTGCTCCATATTCTGTTTACAAGGGCAAAGCTGCATTCTCTTTGAGCCCTTGTCTTCCAACTTTCACCAAGTTGGATTCTGGAGCTGTTGTAGTTGATCGTCGCGGTTCGATAATGATGATTTTCATGCATGCTATTGGGGAGCGCAAGTATGACTGGGAGAAAAAACAGAGATTTGCTCTCTCAGCAACTGAAGTTGGCTCTTTGATAACCATGGGGCCCCAAGATTCTTGTGAATTCTTTCATGACCCCTCTATGTTATCAAGTAATGCTGGGCAAGTTCGGAAGAGCTTATCAATTAAGCCGCATGCAAACGGCAGTGGCTACTTTGTGTCTTTGAATGTTGTCAACAACCTGTTAAATACAAAAGAATTCTTCAGTGTCCCGGTCACAACTGCTGAGTTTGCTGTGATGAAGACAGCTTGCAGTTTTGCATTGCCCCACATTATGGGTTGGGACCGCATTACTCATCAGCAGTCTAGTGGCATGATTGGCCTTCAATCGAAGGTTGACCCACAAGCTTTAGACTTGGAGTGGGATAAGTAA | 723 | 0.4371 | MLKLSRMLPSRYRLLETLSFRKADAGDCMRQCHDLNSSAAFSTATDNKYSAKGYTSNRIFAPYSVYKGKAAFSLSPCLPTFTKLDSGAVVVDRRGSIMMIFMHAIGERKYDWEKKQRFALSATEVGSLITMGPQDSCEFFHDPSMLSSNAGQVRKSLSIKPHANGSGYFVSLNVVNNLLNTKEFFSVPVTTAEFAVMKTACSFALPHIMGWDRITHQQSSGMIGLQSKVDPQALDLEWDK* | 241 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev06g0965 | 240 | SUPERFAMILY | ssDNA-binding transcriptional regulator domain | 56 | 217 | IPR009044 | GO:0003677|GO:0006355 | |
Aev06g0965 | 240 | PANTHER | SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL | 1 | 240 | IPR013742 | GO:0003697|GO:0006355|GO:0006952 | |
Aev06g0965 | 240 | PANTHER | SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL | 1 | 240 | - | - | |
Aev06g0965 | 240 | Pfam | Whirly transcription factor | 65 | 199 | IPR013742 | GO:0003697|GO:0006355|GO:0006952 | |
Aev06g0965 | 240 | Gene3D | Transcriptional Coactivator Pc4; Chain A | 49 | 221 | IPR009044 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev06g0965 | Aev-Chr6 | 6507064 | 6509294 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev06g0965 | 1 | 240 | Whirly Transcription Factor Family | AT1G71260 | 57.787 | 4.08e-93 | 271 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Whirly | Aev06g0965 | Whirly | 3.4e-55 | CL0609 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev06g0965 | - | - | gmx:100817863 | 350.132 |