Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0962 ATGGAACCTAATGACAACCAACTCAGCTCCTACTTTCACCACCATCAGCACCACCACCACCAGCAGGGCGCCTCCACCCCCGCCGGTGTTCCGGCGAACACCGCTCCGACGCCGACCAACGGGCTCTTAGGGAGCGCGGATGGGTCCCACTCGCACATGCTGTACCCTCACACTTCCACGGTGGCGTCTGCGGTGTCAGTGTCGCAGCAGCTGGTGGAGCCCGCCAAGAGGAAGAGGGGTCGGCCTCGCAAGTACGGCACTCCGGAGCAGGCACTCGCCGCCAAGAAGGCCGCCACTACGACGTCGTCTCAGTCCTTCTCTCCTTCCTCCTCCAACAAGAAGACCCTTCCTCATCATCACCATCATGCTTTGGCTACTGCTCCTTCTCCTTCTTCCTCTTCCTACTCTTCCAAGAAATCTACCTCCTTTTCTCTAGGCAATGCAGGACAAGGCTTCACTCCACATGTCATTTCTGTAGCTGCTGGTGAGGATGTCGGCCAGAAAATTATGCTATTTATGCAACAAAGCAAGCGGGAGATGTGCATTTTGTCTGCATCTGGTTCCATATCTAATGCCTCTCTTCGTCAGCCAGCAACCTCAGGAGGCAACATTACATATGAGGGTCGGTTTGAGATTATTTCACTTACCGGTTCCTATGTCCGTAATGAATTCGGAGGTCGTTCTGGTGGTCTCAGTGTATGCTTATCTAGTACTGATGGACAAATTATAGGTGGTGGAGTAGGTGGACCCCTCACAGCGGCTGGTCCAGTTCAGGTCATTGTTGGTACGTTTTTTATGGACACCAAGAAGGATACTAGTGCTGGCGTAAAAGGAGATGCCTCAGCCAGTAAGTTGCCATCACCAGTTGGTGACTCGGTATCAAATTTAGGTTTCCGCCAACCAGTCGACACTTCAAGTGGGAATCCAATCCGGGGAAATGACGAGCATCAAGGTATGGGGGGAAGTCATTTCATGATCCAACAGCTTGGTTTGCACATGACGCCTCCTCGGTCCACAGACTGGGGTGGCCATCCGGAATCCAGAAATGCTGGCTATGATATGTCAGGTAGAACAGGTCACGGGGCGCACCAGTCTCCCGAGAATGGTGGCTATGACCAGATTACTGATTGA 1131 0.5296 MEPNDNQLSSYFHHHQHHHHQQGASTPAGVPANTAPTPTNGLLGSADGSHSHMLYPHTSTVASAVSVSQQLVEPAKRKRGRPRKYGTPEQALAAKKAATTTSSQSFSPSSSNKKTLPHHHHHALATAPSPSSSSYSSKKSTSFSLGNAGQGFTPHVISVAAGEDVGQKIMLFMQQSKREMCILSASGSISNASLRQPATSGGNITYEGRFEIISLTGSYVRNEFGGRSGGLSVCLSSTDGQIIGGGVGGPLTAAGPVQVIVGTFFMDTKKDTSAGVKGDASASKLPSPVGDSVSNLGFRQPVDTSSGNPIRGNDEHQGMGGSHFMIQQLGLHMTPPRSTDWGGHPESRNAGYDMSGRTGHGAHQSPENGGYDQITD* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0962 376 MobiDBLite consensus disorder prediction 22 54 - -
Aev06g0962 376 MobiDBLite consensus disorder prediction 66 140 - -
Aev06g0962 376 MobiDBLite consensus disorder prediction 333 376 - -
Aev06g0962 376 ProSiteProfiles PPC domain profile profile. 148 289 IPR005175 -
Aev06g0962 376 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 368 IPR039605 GO:0003680
Aev06g0962 376 CDD DUF296 153 264 IPR005175 -
Aev06g0962 376 Gene3D - 154 278 - -
Aev06g0962 376 MobiDBLite consensus disorder prediction 94 113 - -
Aev06g0962 376 MobiDBLite consensus disorder prediction 126 140 - -
Aev06g0962 376 MobiDBLite consensus disorder prediction 1 54 - -
Aev06g0962 376 MobiDBLite consensus disorder prediction 287 312 - -
Aev06g0962 376 SUPERFAMILY AF0104/ALDC/Ptd012-like 150 265 - -
Aev06g0962 376 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 368 - -
Aev06g0962 376 MobiDBLite consensus disorder prediction 272 320 - -
Aev06g0962 376 Pfam Plants and Prokaryotes Conserved (PCC) domain 154 264 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0962 Aev-Chr6 6492116 6495525 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0962 33 373 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 51.499 8.54e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0962 - - adu:107491998 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0962 06 6492116 6495525 Aev06g0962 06 6492116 6495525 ECH