LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev06g0962	ATGGAACCTAATGACAACCAACTCAGCTCCTACTTTCACCACCATCAGCACCACCACCACCAGCAGGGCGCCTCCACCCCCGCCGGTGTTCCGGCGAACACCGCTCCGACGCCGACCAACGGGCTCTTAGGGAGCGCGGATGGGTCCCACTCGCACATGCTGTACCCTCACACTTCCACGGTGGCGTCTGCGGTGTCAGTGTCGCAGCAGCTGGTGGAGCCCGCCAAGAGGAAGAGGGGTCGGCCTCGCAAGTACGGCACTCCGGAGCAGGCACTCGCCGCCAAGAAGGCCGCCACTACGACGTCGTCTCAGTCCTTCTCTCCTTCCTCCTCCAACAAGAAGACCCTTCCTCATCATCACCATCATGCTTTGGCTACTGCTCCTTCTCCTTCTTCCTCTTCCTACTCTTCCAAGAAATCTACCTCCTTTTCTCTAGGCAATGCAGGACAAGGCTTCACTCCACATGTCATTTCTGTAGCTGCTGGTGAGGATGTCGGCCAGAAAATTATGCTATTTATGCAACAAAGCAAGCGGGAGATGTGCATTTTGTCTGCATCTGGTTCCATATCTAATGCCTCTCTTCGTCAGCCAGCAACCTCAGGAGGCAACATTACATATGAGGGTCGGTTTGAGATTATTTCACTTACCGGTTCCTATGTCCGTAATGAATTCGGAGGTCGTTCTGGTGGTCTCAGTGTATGCTTATCTAGTACTGATGGACAAATTATAGGTGGTGGAGTAGGTGGACCCCTCACAGCGGCTGGTCCAGTTCAGGTCATTGTTGGTACGTTTTTTATGGACACCAAGAAGGATACTAGTGCTGGCGTAAAAGGAGATGCCTCAGCCAGTAAGTTGCCATCACCAGTTGGTGACTCGGTATCAAATTTAGGTTTCCGCCAACCAGTCGACACTTCAAGTGGGAATCCAATCCGGGGAAATGACGAGCATCAAGGTATGGGGGGAAGTCATTTCATGATCCAACAGCTTGGTTTGCACATGACGCCTCCTCGGTCCACAGACTGGGGTGGCCATCCGGAATCCAGAAATGCTGGCTATGATATGTCAGGTAGAACAGGTCACGGGGCGCACCAGTCTCCCGAGAATGGTGGCTATGACCAGATTACTGATTGA	1131	0.5296	MEPNDNQLSSYFHHHQHHHHQQGASTPAGVPANTAPTPTNGLLGSADGSHSHMLYPHTSTVASAVSVSQQLVEPAKRKRGRPRKYGTPEQALAAKKAATTTSSQSFSPSSSNKKTLPHHHHHALATAPSPSSSSYSSKKSTSFSLGNAGQGFTPHVISVAAGEDVGQKIMLFMQQSKREMCILSASGSISNASLRQPATSGGNITYEGRFEIISLTGSYVRNEFGGRSGGLSVCLSSTDGQIIGGGVGGPLTAAGPVQVIVGTFFMDTKKDTSAGVKGDASASKLPSPVGDSVSNLGFRQPVDTSSGNPIRGNDEHQGMGGSHFMIQQLGLHMTPPRSTDWGGHPESRNAGYDMSGRTGHGAHQSPENGGYDQITD*	377

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aev06g0962	376	MobiDBLite	consensus disorder prediction	22	54	-	-
Aev06g0962	376	MobiDBLite	consensus disorder prediction	66	140	-	-
Aev06g0962	376	MobiDBLite	consensus disorder prediction	333	376	-	-
Aev06g0962	376	ProSiteProfiles	PPC domain profile profile.	148	289	IPR005175	-
Aev06g0962	376	PANTHER	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9	1	368	IPR039605	GO:0003680
Aev06g0962	376	CDD	DUF296	153	264	IPR005175	-
Aev06g0962	376	Gene3D	-	154	278	-	-
Aev06g0962	376	MobiDBLite	consensus disorder prediction	94	113	-	-
Aev06g0962	376	MobiDBLite	consensus disorder prediction	126	140	-	-
Aev06g0962	376	MobiDBLite	consensus disorder prediction	1	54	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev06g0962	Aev-Chr6	6492116	6495525	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev06g0962	33	373	AT-hook Motif Nuclear Localized (AHL) Family	AT3G04590	51.499	8.54e-94	285

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev06g0962	-		-	adu:107491998	526.554

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev06g0962	06	6492116	6495525	Aev06g0962	06	6492116	6495525	ECH

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