Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0960 ATGGCGAACCGGTGGTGGACCGGCCCGGTGGTAGAGAACGCCGGCAACTCCTCGTCCCCAATGAAGAAAGCGGATCTGGGGTTCTCCTCCATGACCAACGAAGCTGCAGCTGCATCATCGTCCATGGCTACACCAAGCACCAAAGATGGTGACAAACTGCTAGATCACATCAGCGACGACCCTAAAGAGGGACCCGCGGAGGTGTCAGCCACGCGCCGCCCTAGGGGCCGCCCCCCGGGATCCAAGAACAAGCCGAAACCACCCATACTGGTGACGAGAGACACCCCCAACACTCTCCGCAGCCACGTCATGGAGGTCGCAAACGGCGCCGACATCGCAGATAGCTTGCTCCAGTTCGCCAGGAAGCGCCAGAGAGGGGTCTGCGTCCTCAGCGCCACCGGCACCGTCGCCAACATCACTCTCCGCCAGCCCACTGCTCCCGGTGCCGTCATGGCGCTTCACGGCCGATTCGAGATCATATCTCTGACGGGGTCCTTTCTGCCGGGACCCACGCCGCCGGGGTCGACGGGGCTGACGGTGTATGTGGCGGGAGCGCAGGGGCAGGTGGTGGGCGGCATCGTGGTGGGCCCGCTGGTGGCGTCGGGAGCGGTTATAATAATGGCGGCTACGTTTTCGAATGCGGTGTACGAGAGGCTGCCCATGGATCAGGAGGGTGAGGGCGGCGCCGCCGTGGGGGAGGGTTCGCCGGCGGTGTATAATATTGGTGGGCAGCAGCTGAGCCATAGCAATGATGAGGAAGCAGCAGCTAATTATAATTCTTCTGGTGCTTGGGACAGTGCTAGGCCTGCTGCACCCTTTTGA 822 0.6241 MANRWWTGPVVENAGNSSSPMKKADLGFSSMTNEAAAASSSMATPSTKDGDKLLDHISDDPKEGPAEVSATRRPRGRPPGSKNKPKPPILVTRDTPNTLRSHVMEVANGADIADSLLQFARKRQRGVCVLSATGTVANITLRQPTAPGAVMALHGRFEIISLTGSFLPGPTPPGSTGLTVYVAGAQGQVVGGIVVGPLVASGAVIIMAATFSNAVYERLPMDQEGEGGAAVGEGSPAVYNIGGQQLSHSNDEEAAANYNSSGAWDSARPAAPF* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0960 273 MobiDBLite consensus disorder prediction 10 47 - -
Aev06g0960 273 MobiDBLite consensus disorder prediction 250 273 - -
Aev06g0960 273 CDD DUF296 100 185 IPR005175 -
Aev06g0960 273 Gene3D - 99 227 - -
Aev06g0960 273 MobiDBLite consensus disorder prediction 250 264 - -
Aev06g0960 273 MobiDBLite consensus disorder prediction 1 96 - -
Aev06g0960 273 MobiDBLite consensus disorder prediction 49 70 - -
Aev06g0960 273 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 213 IPR005175 -
Aev06g0960 273 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 225 - -
Aev06g0960 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 10 255 - -
Aev06g0960 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 255 IPR014476 GO:0003680
Aev06g0960 273 ProSiteProfiles PPC domain profile profile. 96 232 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0960 Aev-Chr6 6477696 6478517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0960 1 230 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 55.556 2.81e-76 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0960 - - aprc:113863548 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0960 06 6477696 6478517 Aev06g0960 06 6477696 6478517 ECH