Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0948 ATGAGGATTATGATAAAGGGCGGTGTTTGGAAAAACACCGAAGATGAAATCTTGAAAGCTGCTGTTATGAAATATGGCAAGAATCAATGGGCTCGAATCTCTTCCCTCCTCGTCCGCAAATCCGCTAAGCAATGCAAGGCTCGCTGGTACGAGTGGCTTGACCCCTCCATCAAAAAGACTGAGTGGACTAGAGAAGAGGATGAGAAGCTGCTTCATCTTGCTAAGCTTATGCCCACACAGTGGAGAACTATTGCTCCAATTGTTGGCCGTACCCCCTCCCAGTGCCTCGAGCGGTACGAGAAACTCCTTGATGCTGCCTGTGTTAAGGATGATAACTATGAGCCTGGCGATGACCCCCGGAAATTGCGTCCTGGAGAGATTGATCCGAACCCTGAGTCGAAGCCTGCACGCCCGGATCCTGTTGACATGGATGAGGATGAGAAGGAGATGCTTTCCGAAGCACGAGCTCGGTTAGCCAACACTAAGGGCAAAAAGGCGAAAAGGAAGGCCAGGGAAAAGCAGCTTGAGGAAGCCAGGAGGCTTGCCTCTTTGCAGAAAAAGAGAGAACTGAAGGCTGCTGGAATTGATATGAGGCAGCGGAGGAGGAAACGAAAGGGGATAGACTATAATGCAGAAATTCCCTTTGAGAAGAGGCCTCCTCCAGGGTTCTTTGATGTTGCTGATGAGGATAGACCAGTGGAACAGCCACAGTTCCCTACTACAATTGAAGAACTTGAGGGAAAAAGAAGAATTGATGTTGAAGCACAGTTGAGAAAGCGAGATGTTGCAAAGAATAAAATTGCAGAGAGGCAAGATGCCCCGTCTGCAATTCTGCAAGCCAATAAGATGAATGACCCTGAATCCGTTAGAAAGAGGTCAAAACTGATGCTTCCACCACCCCAGATATCTGACCACGAATTAGATGAAATTGCAAAGTTGGGTTATGCCAGTGACCTTGCAGGGAGTGAGGAATTTGCAGAAGGTAGTAGTGCTACACGTGCTCTTCTGGCAAATTATGCACAGACACCCAACCAAGGAATGACTCCTTTAAGAACTCCTCAGCGAACACCAGCTGGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATCTGGCCAGGTTGAGGGAGTCTCAGACACCATTATTAGGAGGAGAGAACCCAGAGTTGCATCCTTCGGATTTTTCTGGGGTCACTCCTAAGAAAAAGGAAATTCAGACTCCAAATCCAATGCTGACACCCTCTGCAACTCCTGGAGGTGCAGGCCTTACTCCCAGAACTGGTATGACTCCAGCAAGGGATGGTTTCTCTTATGGCATGACTCCAAAGGGAACTCCTCTGAGGGATGAGCTACGCATTAATGAGGATATGGATATGCATGAAAGTGCAAAGCTTGAGCTACGGAGACAAGCTGATCTGAGAAGAAGTTTGCGCTCTGGTTTAAGCAGCCTTCCGCAGCCCAGAAATGAGTACCAGATAGTGATGCAACCAGTTCCTGAAGATGCTGAGGAACCTGAGGAAAAGATTGAAGAGGATATGTCTGATAGAATGGCCAGAGAAAAGGCAGAAGAGGAGGCTAGGCAGCAAGCATTACTTAGAAAACGGTCAAAAGTCCTTCAAAGGGGACTTCCTAGGCCTCCTGCTGCATCTTTGGAGCTTATTAGGAATTCCCTGATGAGAGCTGATGGGGACAAGAGTTCCTTTGTACCACCCACGTCTATTGAACAAGCTGATGAGATGATACAGAAGGAGCTTCTGACCTTACTGGAGCATGACAATGCTAAGTATCCACTCGATGATTTAGTGAATAAGGAGAAAAAGAAAGGAACCAAACGTGCAGCAAATGGACTTGTTGTCCCTGCGATAGAAGATTATGAGGAAGATGAGATGAAAGATGCTGATCAGTTGATAAAGGAGGAGGTGCAGTACATTCGTGTGGCAATGGGGCATGAAAGTGAATCACTTGATGAATTTGTTGAAGCACATGCAACTTGCATTAATGATCTTATGTTCTTTGCTACTCGTAATGCCTATGGTCTATCAAGTGTTGCCGGAAACATGGAAAAGCTAGCAGCTTTGCAAAATGAATTTGAGAATGTGAAAAGAAGTTTGGATGATGGCAAAGAGAAGGCAGCACGCCTTGAGAAGAAGGTGACTCTAATCACACAAGGCTATGAGATGAGGGCCAAAAAGAGTCTTTGGCCGCAAATCGAAGCTACTTTCAAGCAGATGGACATAGCTGCAACAGAATTGGAGTGCTTCCAAGCTTTACAAAAGCAGGAGCAATTAGCAGCGTCACACAGGATAAACAATCTGTGGACTGAAGTACAGAGGCAAAAGGAGCTTGAGAAGACTTTACAACAGAGGTATGGAGATCTTACTACAGAGCTGGAAAGGATGCAAAATGTCATGGAACAGTACAGGGTACAAGCACAACAGGAAGAAGAAATTGAAGCAAAGAATCGTGAGCTTGAATCTACTGAGACTGCCACGGATGAAATTAATGTTCAGGGTACAGAGAATTGTAAAACTGCAGACCAGCCAGCAGATAATGTACCTGACCAAGCCCCTTCTATCTCCAAGAATGATATGGATACAGATTCTTGCGAAGAGCTTAGGACACATGATACTGATACTAAATTGCCAGATGCAGAGGATAACAGCACGAAGGTGGTAGAAGGTAACAAAACTGAAGATTGTATTGAGAACAGAGAGGCCACACCAGACATTAGTCCTTCAGTGGAAGTAAATAGTATTGAGGGTAATAGTGAGAAGCAACAAGAAACCACTTCACTTGATGAGGGTGATAAGATGGAAGTTGCAGGAGGCAGAGGAGAGGAGGTAAATTAG 2847 0.457 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDDNYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDMRQRRRKRKGIDYNAEIPFEKRPPPGFFDVADEDRPVEQPQFPTTIEELEGKRRIDVEAQLRKRDVAKNKIAERQDAPSAILQANKMNDPESVRKRSKLMLPPPQISDHELDEIAKLGYASDLAGSEEFAEGSSATRALLANYAQTPNQGMTPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKEIQTPNPMLTPSATPGGAGLTPRTGMTPARDGFSYGMTPKGTPLRDELRINEDMDMHESAKLELRRQADLRRSLRSGLSSLPQPRNEYQIVMQPVPEDAEEPEEKIEEDMSDRMAREKAEEEARQQALLRKRSKVLQRGLPRPPAASLELIRNSLMRADGDKSSFVPPTSIEQADEMIQKELLTLLEHDNAKYPLDDLVNKEKKKGTKRAANGLVVPAIEDYEEDEMKDADQLIKEEVQYIRVAMGHESESLDEFVEAHATCINDLMFFATRNAYGLSSVAGNMEKLAALQNEFENVKRSLDDGKEKAARLEKKVTLITQGYEMRAKKSLWPQIEATFKQMDIAATELECFQALQKQEQLAASHRINNLWTEVQRQKELEKTLQQRYGDLTTELERMQNVMEQYRVQAQQEEEIEAKNRELESTETATDEINVQGTENCKTADQPADNVPDQAPSISKNDMDTDSCEELRTHDTDTKLPDAEDNSTKVVEGNKTEDCIENREATPDISPSVEVNSIEGNSEKQQETTSLDEGDKMEVAGGRGEEVN* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0948 948 MobiDBLite consensus disorder prediction 399 413 - -
Aev06g0948 948 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Aev06g0948 948 MobiDBLite consensus disorder prediction 110 177 - -
Aev06g0948 948 Coils Coil 167 187 - -
Aev06g0948 948 SMART sant 58 105 IPR001005 -
Aev06g0948 948 SMART sant 6 55 IPR001005 -
Aev06g0948 948 Gene3D - 59 114 - -
Aev06g0948 948 MobiDBLite consensus disorder prediction 863 904 - -
Aev06g0948 948 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Aev06g0948 948 MobiDBLite consensus disorder prediction 380 446 - -
Aev06g0948 948 Gene3D - 5 58 - -
Aev06g0948 948 Coils Coil 782 829 - -
Aev06g0948 948 Coils Coil 689 716 - -
Aev06g0948 948 MobiDBLite consensus disorder prediction 909 925 - -
Aev06g0948 948 CDD SANT 10 53 IPR001005 -
Aev06g0948 948 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Aev06g0948 948 CDD SANT_CDC5_II 55 106 - -
Aev06g0948 948 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Aev06g0948 948 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Aev06g0948 948 Pfam pre-mRNA splicing factor component 406 655 IPR021786 -
Aev06g0948 948 MobiDBLite consensus disorder prediction 110 160 - -
Aev06g0948 948 Pfam Myb-like DNA-binding domain 10 70 - -
Aev06g0948 948 PANTHER - 1 896 - -
Aev06g0948 948 MobiDBLite consensus disorder prediction 820 948 - -
Aev06g0948 948 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 896 - -
Aev06g0948 948 MobiDBLite consensus disorder prediction 829 862 - -
Aev06g0948 948 MobiDBLite consensus disorder prediction 926 948 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0948 Aev-Chr6 6401997 6406058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0948 1 832 MYB-Related Transcription Factor Family AT1G09770 75.569 0.0 1236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev06g0948 Myb_Cef 2.4e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0948 K12860 - gmx:100801352 1457.97