Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0946 ATGAAGATGGCTAAAACTCCTTGTTGTGAGAAGATGGGGTTGAAGAAGGGACCTTGGACTGCTGAAGAAGATCAGATTTTGATCTCTTTTATTCAGAGATACGGCCATGGAAACTGGCGTGCTCTTCCTAAACAAGCTGGTTTGTTAAGGTGTGGCAAGAGTTGTAGGCTTCGTTGGATAAATTACTTGAGGCCAGATATCAAAAGAGGGAAATTCAGCAAAGAGGAAGAAGAAACCATCCTCAAGTTACATGAAATCCTTGGAAATAGGTGGTCTGCTATAGCAGCAAGATTGCCGGGAAGAACAGACAATGAAATAAAGAATTTTTGGCACACCCATTTGAAGAAGAGGATTGAGAAATTGGGTGGTGGAGTGCACAATAATAATAATGCTGCAAGTTCATCAAGAGCAACTTCAAGCTCAGGGGCTCTAATCACCATGCCACGTGTATCGGTGGTTGCACCAACAACTGATGATGCTTCTAGCTTCAGTAATGGGATTAATAATAATGCACCTACTATTGTAGGAACAGGATTACATAGTGCAGTTTCTTCTGATACTTGTTCATCAGGTGAAGGTGAAACTACTGTGGGAAATCAGATCAGTGAAGAGATGGAATTTTGGTATAATGTATTCATCAAATCAGGGCAGATATCATGA 660 0.4091 MKMAKTPCCEKMGLKKGPWTAEEDQILISFIQRYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEEETILKLHEILGNRWSAIAARLPGRTDNEIKNFWHTHLKKRIEKLGGGVHNNNNAASSSRATSSSGALITMPRVSVVAPTTDDASSFSNGINNNAPTIVGTGLHSAVSSDTCSSGEGETTVGNQISEEMEFWYNVFIKSGQIS* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0946 219 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Aev06g0946 219 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Aev06g0946 219 SUPERFAMILY Homeodomain-like 12 110 IPR009057 -
Aev06g0946 219 Gene3D - 15 68 - -
Aev06g0946 219 Gene3D - 71 142 - -
Aev06g0946 219 CDD SANT 71 114 IPR001005 -
Aev06g0946 219 PANTHER MYB TRANSCRIPTION FACTOR 3 217 - -
Aev06g0946 219 CDD SANT 18 63 IPR001005 -
Aev06g0946 219 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Aev06g0946 219 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Aev06g0946 219 SMART sant 15 65 IPR001005 -
Aev06g0946 219 SMART sant 68 116 IPR001005 -
Aev06g0946 219 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Aev06g0946 219 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Aev06g0946 219 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0946 Aev-Chr6 6394914 6396066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0946 3 218 MYB Transcription Factor Family AT2G31180 47.581 6.65e-74 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev06g0946 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0946 K09422 - gmx:102663040 281.182