Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0941 ATGTCTTCTTCATCTTCTCCTGTTCTTCCCACTCCCTTGGAAAACAAGTACATGAAGCCCCCAGATTCTTTTCAGCTTTCCCCCATCAGAGACCTCCCTGCAAATCCTGCCTCATTGCAACAAACTACATCATCCAATTCTGCCACCAGAAGTGCCGGACACACGTTTTCATCCCCTTCTGAATGTCCTGATGCAATCCCTTTAAGGCAGTATCACCCTTCTCCCTTTGTTTCTCAGACTTTAGATGACAATGTGTCCTCCTCTGAGATACATTCGACGACATTCATCTCTCACGGTCAAGAAAGCGATGACATCTCCTGGGGACCAGACCCGTTTCAGGACATTCTTGGATTCTCCGAAAATGTACCTGTCCAGCATGATCAGGTGGAGAACAGTTCTTGCTATATGAATAATGACAATGTCAAGAAATCTGATTTTGGGGAGTGGGTTGATCAGTTAATGTCCATTGATGATTCTTATCACCCAAATTGGAGTCAGCTTCTTGGTGATGAGAATGTATCAGAACCAAAACCAAAGGCCATCCAGGTTTCCCAGAAGGAGAATAAACCATCTGGGGAAGTTAATGGTGCTACTAACTCAGGATCTACTGCAACACAAACTAAGCCTAGAATGCGTTGGACACCAGAACTTCATGAGGCTTTTGTGGAAGCGGTCAATCAACTTGGTGGCAGTGAGAAGGCTACTCCCAAGGGCGTCTTGAATCTGATGAAAGTTGAGGGCCTTACCATCTATCATGTAAAAAGTCATCTACAGAAGTATAGAACAGCCAGGTACAAACCTGAGACTTCATCAGAAGGAACTTCTGAGAAAAAGTTGACTTCAATCGAGGAAATGAAATCTCTAGACTTGAAAACGAGTAAGGGAATCACTGAGGCATTGCGGTTGCAGATGGAACTTCAGAAGCGGCTTCACGAACAACTAGAGATTCAAAGAAAGTTGCAGATTCAAATAGAAAACCAAGGGAAGCGGCTTCAGATGATGTTTGAGAAGCAGAGAGAGATGGGAGAGAGCAAGTTGAAGGGCTCCTCCTCCCCTTTAGATGAACCTTCTGCTCCACTATCAGACACAGAAATGCCTTCTCCTCAAGCAGATAGTTTAGAAACTTCAAAAGAAGAACGCGACAAATTAGGAAGTGACACCTGCATTAAGAAAGCTGTGCCTGAAGAGAGTTCCCAGGATCAATGCACAAAGCAAATGGTAGATGAATCTGAAGTTACCAATAAACATGAGGCAGTAGATGATGATGATGAGTGTGCTGCACCACCCACAAAACGGGGAGAAACACCAGTGGAATTTCTGCACAGGCTAATAGCTGGCAGGACGGAAGGTCATAATGCAGAAGTTCAATCAGTGTGTGTCTGCACTCATCAGATTTCCTATCTTAGCCTTTATTTGAAACTTGGATTTCTTCCGGCCAGCCTCCGCGCCGCCCTGACGTACTCCCTCGGCGTCTTCGCCCTCCGCAGACCCTTGTTCCACAGAGTCCTCGACTACGAAGATGAATCCTTCGCCCTCCTCATGCTCATCCTCGAAACCCATAGCTTACGAACCTCAGATGCTTCTTTTTCTGAATCTCTGTACGGTCTCCGGAGAAGACCAGTCAATGTCAGAGTCGAGACTGATGGTGGTGCCGCCGCCACTCCCAGCTCTGATCAAGGGACTCCCAATTCAGGCTTGAGGAGGCGCCAGAGAGTTCTCTCTGTTGTTTTTCTGGTTGTGTTGCCATATTTGAAATCTAAATTGCATTCAATCTACAATAGAGAAAGGGAAGCTAGGTTTCAAGCTAGCTTATGGGGTGATGATAGTGAAGGGTTTGATGTCAGAGGGAGTTTTGAAGAAGATTCACCAGAGTCATTGGGAAACTTGGATGCTGATAATGCCTCTTCTGTTAGAGCTCGCGTCAGGAAGAGAGTTCAGAAAATTGTTGGATTTTGTTATCCTTGGCTACATGCTGGTACTGAGGGCTTGCAGTTTGCATACCAGCTATTATACCTGTTGGATGCTACTGGATACTACTCACTAGCACTGCATGCGCTTAGGATTCAAGTCTGCCGAGCTACAGGGCAAGAGCTGATGGATACCTCATCTAGAATTTCAAAGATACGTAGCCGTGAACGTGAGAGACTTCGCGGACCTCAATGGCTAAAGACACTGCAAGGAGCACTGCTCAGCAGTATGTATGCAGTACTTGACTATGCACAAACTGGTTTGATTGCAGCAGTGTTCTTCTTTAAAATGATGGAATGGTGGTACCAGTCGGCTGAGGAGAGAATGTCAGCTCCCACAGTATATCCCCCTCCCCCTCCTCCTCCTCCTCCAAAGGTAGCAAAAGAGGGGATCCCACTACCACAAGACAGAACAATTTGCCCATTGTGCTCGCAGAAGCGTGCAAATCCATCTGTAGTTACAGTTTCGGGCTTTGTCTTCTGCTATGCTTGCATATTTAAGTATATCTCACAGTATAAGCGCTGCCCAATTACATTGATGCCAGCAACAGTTGACCAGATAAGGAGACTATTTCATGATGTTTAG 2553 0.4583 MSSSSSPVLPTPLENKYMKPPDSFQLSPIRDLPANPASLQQTTSSNSATRSAGHTFSSPSECPDAIPLRQYHPSPFVSQTLDDNVSSSEIHSTTFISHGQESDDISWGPDPFQDILGFSENVPVQHDQVENSSCYMNNDNVKKSDFGEWVDQLMSIDDSYHPNWSQLLGDENVSEPKPKAIQVSQKENKPSGEVNGATNSGSTATQTKPRMRWTPELHEAFVEAVNQLGGSEKATPKGVLNLMKVEGLTIYHVKSHLQKYRTARYKPETSSEGTSEKKLTSIEEMKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRKLQIQIENQGKRLQMMFEKQREMGESKLKGSSSPLDEPSAPLSDTEMPSPQADSLETSKEERDKLGSDTCIKKAVPEESSQDQCTKQMVDESEVTNKHEAVDDDDECAAPPTKRGETPVEFLHRLIAGRTEGHNAEVQSVCVCTHQISYLSLYLKLGFLPASLRAALTYSLGVFALRRPLFHRVLDYEDESFALLMLILETHSLRTSDASFSESLYGLRRRPVNVRVETDGGAAATPSSDQGTPNSGLRRRQRVLSVVFLVVLPYLKSKLHSIYNREREARFQASLWGDDSEGFDVRGSFEEDSPESLGNLDADNASSVRARVRKRVQKIVGFCYPWLHAGTEGLQFAYQLLYLLDATGYYSLALHALRIQVCRATGQELMDTSSRISKIRSRERERLRGPQWLKTLQGALLSSMYAVLDYAQTGLIAAVFFFKMMEWWYQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPQDRTICPLCSQKRANPSVVTVSGFVFCYACIFKYISQYKRCPITLMPATVDQIRRLFHDV* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0941 850 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 205 265 IPR017930 -
Aev06g0941 850 Pfam MYB-CC type transfactor, LHEQLE motif 296 340 IPR025756 -
Aev06g0941 850 SUPERFAMILY Homeodomain-like 205 262 IPR009057 -
Aev06g0941 850 Pfam Pex2 / Pex12 amino terminal region 477 760 IPR006845 -
Aev06g0941 850 Gene3D - 207 266 - -
Aev06g0941 850 MobiDBLite consensus disorder prediction 1 65 - -
Aev06g0941 850 PANTHER PEROXISOME BIOGENESIS PROTEIN 12 477 849 - -
Aev06g0941 850 MobiDBLite consensus disorder prediction 177 209 - -
Aev06g0941 850 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 795 847 IPR013083 -
Aev06g0941 850 MobiDBLite consensus disorder prediction 411 429 - -
Aev06g0941 850 Pfam Myb-like DNA-binding domain 210 261 IPR001005 -
Aev06g0941 850 SUPERFAMILY RING/U-box 795 846 - -
Aev06g0941 850 Coils Coil 297 317 - -
Aev06g0941 850 MobiDBLite consensus disorder prediction 178 209 - -
Aev06g0941 850 MobiDBLite consensus disorder prediction 411 432 - -
Aev06g0941 850 MobiDBLite consensus disorder prediction 350 372 - -
Aev06g0941 850 MobiDBLite consensus disorder prediction 34 58 - -
Aev06g0941 850 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 208 262 IPR006447 GO:0003677
Aev06g0941 850 MobiDBLite consensus disorder prediction 339 384 - -
Aev06g0941 850 CDD mRING_PEX12 796 837 - -
Aev06g0941 850 PANTHER PEROXISOME ASSEMBLY PROTEIN 12 PEROXIN-12 477 849 IPR017375 GO:0005779|GO:0008022|GO:0008270|GO:0016558
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0941 Aev-Chr6 6366032 6371921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0941 89 366 G2-like Transcription Factor Family AT3G04450 50.842 1.07e-76 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev06g0941 Pex2_Pex12 3.4e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0941 K13345 - mtr:MTR_7g115530 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0941 06 6366032 6371921 Aev06g0941 06 6366032 6371921 ECH