Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0939 ATGGTTCCTAATCCAAGAGCTATTAAGGCCTTAAATGCTATGAAGGTCTTAGGAATTTCAACTGAAGAGGTGAAGCCTGTGTTGGTAGAGTTGTTAAGAGTGTACGATAGAAACTGGGAACTTATTGAGGAGGACAATTATAGGACACTTGTAGATGCATACTTTGAGTTCAAGGAAGATAAGGGAATAAGAGGTAAGAAAAAAGCTCCTTTCAGTTGTCATGATGGAGAAAGACCAAGACAGAAACTACGCTTGATAGATGAAGATGACCAGACTTTGTCCACAAAGGACAACTCAATCCAAAAGTTATCTGCAGAAGTTAAGAGAATGCCACCAGGTATTAAGCCCAGAACCAGCACCCCAGCATCACATACAAGCTTGAGTGTGGCAGGATTATCTGAGTCTTCAAATGGAGATCGGTGTGTCAAATCTCTGTCAACTCCAAATCAAATCATTCAAAGGAAAGATACTTCATCGTCATGCAACAATAATACCAGAACTCGTAGGGGAAATATTCCTATTGCTTCTTCACCCCTTGGAGAAGTTAAATTGTCTTTAAACTGCGACTCTGCCTTGGGACAACCAAACTTCTGTGCTCCTAACTTGGATGCTGTCATGAAGTTCGTGGAAGAGAAATACCTTATGCCTTGCAGGAGTATTGGGCCTCAACCTTCTATGGTGAAGCTACTAGATGGTTTATGCAGTAGTTTTCTGAGGATGGGACATAGAAAAGGATCAAATTCAAACTATGCCAATTCGCACATGGCATGTCAGCCACAACAATCTGCTACTCAAGATAAAAGCAATTCCTCTCATTTTATCAGTGACATTTCGAAAGGTTCAGAAAAGGTGAAAATCTCATTATTAGATGAAATTGGCAGCGAAGATTTGCCGTCCAAGTTTAACTATATTCCGCATAGTATAATATACCAAAGTGCTAATGTAAATATCTCATTGGCTCGGATTTCGGATGAGGGTTGTTGTTCTGATTGTTCAGGCAACTGTCTTTCCTTATCACTGCCTTGTGCATGTGCTCGGGAAACCGGTGGAGAGTTTGCTTACACTCCTAAGGGTTTGTTAAAAGAAGAGTTTCTAACTGCTTGCGTGTCTATGAAGAATGAACCTCAACAACATCATTTCGTGTATTGTCAAGAGTGCCCACTGGAGAAGTCTAAGAACGAGTACCTGCCCGACCGATGCAAAGGGCATATGGTTAGGAAATTTATAAAAGAATGTTGGAGGAAATGTGGATGTGACATGCGGTGTGGAAATCGGGTTGTGCAACGAGGTATAAGATGCAAGTTGCAGGTTTTCATGACTCGTGAAGGAAAGGGCTGGGGCCTTAGAACATTAGAGGATTTGCCCAAGGGAACTTTCGTATGTGAATATGCAGGGGAAATATTGACCAATACAGAGTTATACGAAAGGATTATGGAGAATAGTAGTGGCAATGACAGGCATACATATCCTGTTACACTTGATGCAGACTGGGGATCGGAAGGGGTGTTAAAGGATGAGGAGGCACTATGTTTGGATGCAACATATAATGGAAATGTTGGAAGGTTTATCAATCATAGGTAA 1581 0.413 MVPNPRAIKALNAMKVLGISTEEVKPVLVELLRVYDRNWELIEEDNYRTLVDAYFEFKEDKGIRGKKKAPFSCHDGERPRQKLRLIDEDDQTLSTKDNSIQKLSAEVKRMPPGIKPRTSTPASHTSLSVAGLSESSNGDRCVKSLSTPNQIIQRKDTSSSCNNNTRTRRGNIPIASSPLGEVKLSLNCDSALGQPNFCAPNLDAVMKFVEEKYLMPCRSIGPQPSMVKLLDGLCSSFLRMGHRKGSNSNYANSHMACQPQQSATQDKSNSSHFISDISKGSEKVKISLLDEIGSEDLPSKFNYIPHSIIYQSANVNISLARISDEGCCSDCSGNCLSLSLPCACARETGGEFAYTPKGLLKEEFLTACVSMKNEPQQHHFVYCQECPLEKSKNEYLPDRCKGHMVRKFIKECWRKCGCDMRCGNRVVQRGIRCKLQVFMTREGKGWGLRTLEDLPKGTFVCEYAGEILTNTELYERIMENSSGNDRHTYPVTLDADWGSEGVLKDEEALCLDATYNGNVGRFINHR* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0939 526 MobiDBLite consensus disorder prediction 118 140 - -
Aev06g0939 526 MobiDBLite consensus disorder prediction 153 172 - -
Aev06g0939 526 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 111 - -
Aev06g0939 526 SMART preset_2 274 417 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aev06g0939 526 Pfam Pre-SET motif 277 425 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aev06g0939 526 ProSiteProfiles Pre-SET domain profile. 331 430 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aev06g0939 526 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 127 526 - -
Aev06g0939 526 MobiDBLite consensus disorder prediction 110 140 - -
Aev06g0939 526 CDD SET_SETDB-like 299 526 - -
Aev06g0939 526 Gene3D SET domain 251 526 IPR046341 -
Aev06g0939 526 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 111 - -
Aev06g0939 526 Gene3D - 1 60 IPR043017 -
Aev06g0939 526 Pfam SET domain 445 525 IPR001214 GO:0005515
Aev06g0939 526 Pfam Ubiquitin-binding WIYLD domain 6 59 IPR018848 GO:0018024
Aev06g0939 526 SUPERFAMILY SET domain 284 525 IPR046341 -
Aev06g0939 526 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 127 526 - -
Aev06g0939 526 MobiDBLite consensus disorder prediction 153 174 - -
Aev06g0939 526 ProSiteProfiles SET domain profile. 433 526 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0939 Aev-Chr6 6351811 6354443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0939 409 525 C2H2 Transcription Factor Family AT2G23740 49.153 5.22e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aev06g0939 Pre-SET 2.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0939 - - var:108346078 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0939 06 6351811 6354443 Aev02g0839 02 7283198 7290179 PCT