Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0921 ATGGCGGCAAAGTTTGTAGTGTTGGTGGTGTGTGCAATTTGCGCGATAGGAGTGGCGTATGGTCAGAGTGCTACGAATGTGAGAGCCACATATCACTTGTACCAACCAGAGCAGCATAACTGGGACTTACTTGCCGTGAGTGCATACTGCGCCACTTGGGATGCAAATAAGCCCTTCTCATGGCGCAGCAAGTATGGCTGGACCGCCTTCTGCGGCCCTGTTGGCCCCACCGGTCAAGCAGCTTGCGGCAGGTGCTTGAGGGTGACAAACACAAGAACAGGTGCTCAACAAACAGTCAGAATAGTGGATCAGTGCAGCAACGGAGGGTTGGACTTGGATATCGCTGTCTTCCGAAAGCTGGACACTGACGTGGGCGTGTCCTGCTCCACTTTGGATGCTAACAAGCCTCTCTCATGGCGTAACAAGTATGCCTGGGCAGCCTTCTGTGGGCCTGAGGCCCAACAAGCATGTGGCAGAGCAATCCAATCCAATCCAGATCCGAGGCTGAGTGAATCCCTCCCATTGGAAGAGATGGTGGCGAACCAGGTGGCAAAGGTGAAGCGGCAGACGCTGGAAACATGCATGACATGCCCTCTCTGCAATAAGCTTCTCAGAGACGCCACCACCATCTCCCTCTGCCTCCACACCTTTTGCAGGAAGTGCATATATGAGAAGCTTTCAGATGAGGAGGTGGATTGCTGTCCTGTATGCAACATTGACCTGGGATGTCTTCCTGTGGAAAAACTCAGGCCAGACCACAATTTGCAAGATATTAGGGCCAAGATATTCCCTTTAAAGCGGAGAAAGATCAGAGCCCAAGAAGTTGTTCCTTCAATATCGCTGCCAGCAAAACGGAAGGAAAGATCTCTTTCTTCATTGGTGGTTAGTGCTCCCAAAGTTTCAACTCAGACCGGCCTTACCGGAAAAAGAACAAAACCTGGAACAAGAAAGGCTGCTGCTTTACGTGGATGCAGTTTTCTCCTTGAAGAATCTGTAAAGGCAGAAGAAACATGTGGTGAAGATAATCCGGATTCATGCATAGCTGAGCCTTCTAAAAAGAATAGGTCCAGTGAAGATACAGAGAACAGTATGGAACTTGCAGAAGGGAAGGCTGATCTCTGGACGCCCTTGAACTGTCTTGTTGAAGCTGCCAATAGAACAAAGTCCTCTAGGTCAAACTCACAAGGGACTTCTAATGCCAAGTTAGAGTCTCCAACTACTCCTCGTGGTGGATTAGATATGTCCGAAATTACAACCAAATCAGAACCACCTGCTTCTCTCCAGAGTGAATTAAACATGTCTAAAACCAAAAACAAGGATAATGGGCATAAAAAGTTTGAAGATGATAAGGAAGGAAACACCTTGCCTTCAGGACCAGTAAAGCGAAGAAGGCTGCGCGCGAAAAAAGCAGAAGCATCTGAGATGTCTACCTCAGCCCAAGTCATGCCAGATGCAACTGGAAGCAGGAGCAACAGAAAAAACAGTCCTATTTGGTTTTCATTAGTTGCTTCAGAGGACCAGAAAGGAGATGTCCCCTTGCCACAGATCTCAGCATGTTATTTAAGAATAAAGGATGGTACTGTACCTGTCTCATTTATTCAGAAGTACCTTGCAAAGAAACTTAATCTAGCCAGCGAAGCAGAGGTGGAAATAATGTGCAGAGGTCAACCAGTGGTGCCAACTTTGCCACTGCATAACTTAGTAGATCTGTGGTTCCGAACAGCATCAACCTCAAAAAAGATACCTGCATCTGTGGGCTCCTCGGCTAAGGACTTTGTCATGGTTTTGTCATATTGTCGGAAGCCTGTACCTCATTGA 1818 0.4769 MAAKFVVLVVCAICAIGVAYGQSATNVRATYHLYQPEQHNWDLLAVSAYCATWDANKPFSWRSKYGWTAFCGPVGPTGQAACGRCLRVTNTRTGAQQTVRIVDQCSNGGLDLDIAVFRKLDTDVGVSCSTLDANKPLSWRNKYAWAAFCGPEAQQACGRAIQSNPDPRLSESLPLEEMVANQVAKVKRQTLETCMTCPLCNKLLRDATTISLCLHTFCRKCIYEKLSDEEVDCCPVCNIDLGCLPVEKLRPDHNLQDIRAKIFPLKRRKIRAQEVVPSISLPAKRKERSLSSLVVSAPKVSTQTGLTGKRTKPGTRKAAALRGCSFLLEESVKAEETCGEDNPDSCIAEPSKKNRSSEDTENSMELAEGKADLWTPLNCLVEAANRTKSSRSNSQGTSNAKLESPTTPRGGLDMSEITTKSEPPASLQSELNMSKTKNKDNGHKKFEDDKEGNTLPSGPVKRRRLRAKKAEASEMSTSAQVMPDATGSRSNRKNSPIWFSLVASEDQKGDVPLPQISACYLRIKDGTVPVSFIQKYLAKKLNLASEAEVEIMCRGQPVVPTLPLHNLVDLWFRTASTSKKIPASVGSSAKDFVMVLSYCRKPVPH* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0921 605 Gene3D - 479 580 - -
Aev06g0921 605 ProSiteProfiles Zinc finger RING-type profile. 197 238 IPR001841 -
Aev06g0921 605 SMART ring_2 197 237 IPR001841 -
Aev06g0921 605 SUPERFAMILY Barwin-like endoglucanases 22 123 IPR036908 -
Aev06g0921 605 Pfam Zinc finger, C3HC4 type (RING finger) 197 237 - -
Aev06g0921 605 ProSitePatterns Zinc finger RING-type signature. 213 222 IPR017907 -
Aev06g0921 605 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 180 287 IPR013083 -
Aev06g0921 605 SUPERFAMILY RING/U-box 191 262 - -
Aev06g0921 605 ProSitePatterns Barwin domain signature 1. 82 90 IPR018226 GO:0042742|GO:0050832
Aev06g0921 605 MobiDBLite consensus disorder prediction 386 492 - -
Aev06g0921 605 MobiDBLite consensus disorder prediction 473 492 - -
Aev06g0921 605 MobiDBLite consensus disorder prediction 436 457 - -
Aev06g0921 605 ProSiteProfiles Barwin domain profile. 128 151 IPR001153 GO:0042742|GO:0050832
Aev06g0921 605 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 181 601 IPR044807 GO:0004842
Aev06g0921 605 MobiDBLite consensus disorder prediction 337 369 - -
Aev06g0921 605 MobiDBLite consensus disorder prediction 386 435 - -
Aev06g0921 605 PANTHER UBIQUITIN PROTEIN LIGASE DRIP2, PUTATIVE-RELATED 181 601 - -
Aev06g0921 605 MobiDBLite consensus disorder prediction 337 366 - -
Aev06g0921 605 PRINTS Barwin domain signature 95 113 IPR001153 GO:0042742|GO:0050832
Aev06g0921 605 PRINTS Barwin domain signature 76 94 IPR001153 GO:0042742|GO:0050832
Aev06g0921 605 PRINTS Barwin domain signature 57 75 IPR001153 GO:0042742|GO:0050832
Aev06g0921 605 ProSiteProfiles Barwin domain profile. 22 123 IPR001153 GO:0042742|GO:0050832
Aev06g0921 605 Pfam Barwin family 124 162 IPR001153 GO:0042742|GO:0050832
Aev06g0921 605 Pfam Barwin family 23 123 IPR001153 GO:0042742|GO:0050832
Aev06g0921 605 Gene3D - 22 125 IPR036908 -
Aev06g0921 605 Gene3D - 126 167 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0921 Aev-Chr6 6234501 6242505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0921 178 524 C3H Transcription Factor Family AT2G30580 46.092 6.02e-89 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0921 K16277 - gmx:100783999 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0921 06 6234501 6242505 Aev06g0921 06 6234501 6242505 ECH