Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0920 ATGGAACCCTTGTGTTGTTGTGCATTATTGGCCCTGGAAACTTGGTGGGCTTTAAGGGTTGAAGAGGGCTGTGGAAACAACAATGAAGAAGTGGAATCCAAACTCAAGATCACTACCAACACTGGCTTTACAGGGAAGAGAGGTTTTTCAGACACCACAAGCAGTGCTTCAAATGTTGATTTGAAGCTTAATCTCTCTTCAAACAATGTTGTGTTGTCCTCATCATCTGATGTCAACAAGGCTAAAGAGAAGAGCAACGCTGCTACTTCTTCTAGTATTGCAGCATCTCCTTCTGCTCCTGCTAATGACCCTGCAAAGCCACCTGCAAAGGCACAAGTGGTGGGTTGGCCACCAGTGCGGTCATTCAGGAAGAACATAGTAAACGGTCAACGGAGTAGCACCACCGCCGCCGCCGCCGCCACCGATGTAGCATCAGAAAAGGGCACAAACACTACGACGAGGAGTACAAGAAGCGTGATGAACGGTGGAGCAGCATTCGTGAAAGTGAGCATGGACGGTGCACCGTATCTGCGGAAGGTGGACCTGAAGCTGTACAAGAGCTACCAAGAGCTGTCTGATGCCCTGGCCAATATGTTCAGTTCCTTCACAATTGGTAAATGCGGGTCCCACCACGGCATGATGAAGGACTTCATGAATGAGACCAAGCTCATTGATCTCTTGAACGGCTCTGATTATGTCCCTACCTATGAAGACAAAGACGGTGACTGGATGCTTGTCGGCGACGTTCCATGGGAAATGTTCGTGGAATCATGCAAGCGCCTCCGCATAATGAAAGGATCCGAGGCAATTGGGCTAGCACCAAGAGCAGTGGAAAAGTGCAAGAACAGAAGCTGA 855 0.4912 MEPLCCCALLALETWWALRVEEGCGNNNEEVESKLKITTNTGFTGKRGFSDTTSSASNVDLKLNLSSNNVVLSSSSDVNKAKEKSNAATSSSIAASPSAPANDPAKPPAKAQVVGWPPVRSFRKNIVNGQRSSTTAAAAATDVASEKGTNTTTRSTRSVMNGGAAFVKVSMDGAPYLRKVDLKLYKSYQELSDALANMFSSFTIGKCGSHHGMMKDFMNETKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKCKNRS* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0920 284 Pfam AUX/IAA family 40 275 IPR033389 -
Aev06g0920 284 ProSiteProfiles PB1 domain profile. 164 266 IPR000270 GO:0005515
Aev06g0920 284 MobiDBLite consensus disorder prediction 74 98 - -
Aev06g0920 284 MobiDBLite consensus disorder prediction 130 155 - -
Aev06g0920 284 MobiDBLite consensus disorder prediction 74 113 - -
Aev06g0920 284 Gene3D - 159 278 - -
Aev06g0920 284 SUPERFAMILY CAD & PB1 domains 155 265 - -
Aev06g0920 284 PANTHER AUXIN-INDUCED PROTEIN AUX28 29 277 - -
Aev06g0920 284 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 29 277 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0920 Aev-Chr6 6225365 6230533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0920 127 274 B3 DNA Binding Superfamily AT4G23980 27.027 2.20e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Aev06g0920 AUX_IAA 9.6e-85 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0920 K14484 - gmx:100796888 283.108