Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0906 ATGTTTGATGGAGTGCCTGAGCCAGTGGCTGCAGAGCAGTTGTTCCACCAATTCATAGCACCAACAACAACAAGGACCACCTCCTCCACTCCTCCTCCTCCTCTTCCTTCTCCTACTCATCATCACCATTTATCATCCTCCTCCTTATTCCCTATGCTCCATCATGCTTCTCCAACTCCACATAATAATAATAATACTACTACTACTACTACTTTCCTACCACCCTTTGATCCATATAATACCTCTTCTCATCAATCTCATCATCATCATCAGATTCTTCCACTTCAACCCCAACACAGCCTACTCTTCCACCCATTGCAGCACCACAAAGATAATGCAGAGCAACAAGAGATGAAGGAACCAACAATCATCAACAACTTCGACACTCATCATCATCAGAGAGATCAACAACAAAGACAATTATTACCTGATGGTGATGATGGTGATGATGATAATGAGTTGATGATGATGGGTTCTTCTTCTTCTTCATGGACTAATGATGAAGTTCTTGCACTCTTGAGGATCAGATCTACCATGGAGATCAGTTGGTTCCCTGAACTCACTACTTGGGACCATGTCTCTAGGAAGCTAGCAGAGCTTGGATTTATTAAGAGTGCTGAGAAGTGCAAGGAGAAGTTTGAAGATGAAAGCAGATATTTCAACACCAGCATAATTAACTGCTCCAAGAACAACAATAATAATAATTATCGGTTCCTCAGTGAGCTTGAAGAGCTTTATCAAGGCACTGCTAGTGATCATAATAATAGTAATAGTAATAATAACCAAAACATTGATAGTCATCATCATGTTGCTACTGAAAAGACTGCACACCAACTTGAAGACCATCACATGATGGGCCATCATCATCAAGCATTGGAAGAGGATTCATTAATCAAACAGAGTGAGGAGGAAAGTGCTGACAAGACCAATAATATTATTATTGTGGAAAAGTCAACAACAAGTGATGAGAAAAGAAAGAGGAAGAAGAGGAAGAGGAGCAGCATGAGGTTTGAGATGTTCAAGGGTTTCTGTGAGAGCATTGTGAACAGAATGATGGCTCAGCAAGAAGAGATTCACAACAAGCTCCTTGAGGACATGATGAGAAGAGATCAAGAGAAGTTTGCAAGAGAGGAGGCCTGGAAGAAGCAAGAGATGGAGAAGATGAACAAGGAGCTTGAGATTATGGCTCAAGAACAAGCCATTGCTGGTGATAGACAAGCCACCATCATTCAATTCTTGAAGAAATGTGCAGCAGCCAATAATTCCCAAAATTCTAATAAGGATCCAAAACAGAATGGAAGCACTACTACTAATAACTACTATTCTTGTCCTCCTCCATCATTGCACTCCCAAAACCCTAACCCTTCAACAGGAGAAAGCACTCTTCTTGAGCCAATAACAACAACAACTTCTTCTAATATGATTATTCTAGATAATCATCAAGTTCATCAAGCCACTTGTTCTTCCCCAATCCCGGAAGAAAATCTAAACCCTAGCTCGAGCAGCACACTCCAAGTCCTTCCTTCCCCTTCAAGTTCATCTACACCTCCCAACATTATCAGCAAGCAGGATAGCAATCCACCACCAGAGTCAAATTCAATCTCCACATTATTTAAACCATCCTCCTCCTCAAATACCAACAATAGTATAACTGATGATGATCATCATCAGAAAGATGATGTTGGGAGAAGATGGCCAAGAGATGAAGTGTTGGCACTGATAAACCTCAGATGCACAATCCTAAAGAACAACAACAACAGCAGCAACAATGAACTAGAGAAGGCAGAAGGAAACAACATCAACAACCAGAACAAGGTGGTTCCTCTGTGGGAGAGAATCTCACAAGGGATGGCAGAGCTTGGATACAAGAGGGGTGCAAAGAGGTGCAAAGAGAAATGGGAGAACATAAACAAGTACTTCAGAAAAACCAAAGATGCTAATAAGAAGAGGTCCATTGATTCTAGGACATGTCCCTATTTCCATCAGCTCAGAAATCTTTATAGTGATCAGGGGAAACTACTTGATGATGCTCCTCCACAAGAAAACCAGAAGGTGAATAGTAATTCATCAGGGCAATTATTAGCAGCTGAATCTTCTTCTCATCAAGTGGGGTCTGCTGAATTATTCAGTACTTTGAATGATGATAATGATATTGATGATCATGGAGGAGAGGGAAATCTAATACCTGTTGATGTCATGGAACAGTATGAAGTGCTTGAGCAAATTGGTAAAGGTGCTTTCGGTTCTGCTCTTCTTGTCAAGCATAAGCACGAGAAGAAAAAATATGTGCTGAAGAAAATTCGGCTCGCTCGCCAAAGTGAGCGCTCTCGTAGGTCTGCACACCAGGAGATGGAGCTCATTTCCAAATTAAGAAATCCATTTATAGTGGAGTATAAAGATTCATGGGTAGAAAAGGGTTGCTATGTGTGCATTATTATAGGTTATTGTGAGGGGGGAGATATGGCGGAAGCTATAAAGAAAGCTAATGGTGTGATGTTTCCTGAGGAGAAACTTTGTAAGTGGCTTGTTCAACTTCTTATGGCACTTGACTACTTGCACATGAACCATATTCTTCATCGTGATGTCAAGTGTTCAAATATATTCTTGACAAAAGATCATGACATACGTCTTGGTGATTTTGGACTTGCCAAAATGTTGACTTCAGATGATCTTACTTCCTCTGTTGTGGGAACACCTAGCTACATGTGCCCTGAACTCCTTGCCGACATTCCTTATGGTTCTAAATCAGATATTTGGTCCTTGGGATGCTGTATATATGAAATGTCCTCGCTTAAGCCTGCATTCAAAGCATTTGATATCCAAGCACTGATAATCAAGATTAATAAGTCAATAGTGGCTCCTCTGCCAACAAAATATTCTGGAGCATTTCGAGGTCTTGTTAAAAGCATGCTGCGGAAAAATCCAGAGCTCAGGCCTAGTGCTGCAGAGCTACTTGGGCACCCACATCTTCAACCTTATGTTCTTAAGATCCATCTCAAAATGAATAGCCCCAGGCGAAACACATTGCCGGGTCATTGGCCAGAATCCAACTACATGAAGAAAACAAGATTTTTGAGCTCAGAAGATGATCCTGCTTCCATATATAGGGATACGTGGCATTCTTCTTTCAGTAATGATCGGAATTTAAATCCTAGTATATCTGGAGCGGGGCAAGATTCTCATTGCTCTACCCTAGAAATAGATTGTATGCCTGATGATTTGAACCAAAGATTAGCAGAACTGTCTGTTAGAGATAGCCATGAAGTCAAGTCAGTGCACAAGCCAGTTGTTTCTAGAACACCTAGCACTGCCAAGACTTCAAGACTCACTTCATCTAAAGCTTATGCTACCCCCAAGAAATCAATGGAACCCTCAAAGAATCCAAAGGCGCTTCCTGTTTCGCACAGCACCAAACTACCTTCCCATACTCCAAGTCGCAGAGCATCATTACCAGCGCCAAGAAGTGGTTCCATACAGAAGTCGCACCATAGGCCCAGTGTTGGTTTACTTGACCATGTCAATTCGCCCAATGTTTCAGTTAACGCTCCCCGTATTGATAAGATAGCGGAATTCCCTTTAGCATCGTATGAAGAACATTTGTTTCCCATCACTAGACCTTCATCAACCTCTGCACAGGGTTCCACATGCTCGCCTCCTCGTGGAAGCGATTCAACTATGATAGACAAATGCACAATTGAAGTATGTGATAGAGCATACATCAAGCCAAGATCTACAGATGCTTGGCAGGGAATCAAGCGCAACATGTTAAAGAACGATGAGGTTAAAAGCAGCTCATCTGATCAAAACGCAACTGCTGGAGCATCAAGTAATAACTCTTCAGACTTGAGGCGCAGACAGTTCGACACTTCATCATTCCAACAAAGGGCTGAAGCCCTAGAAGGGTTGCTTGAGTTTAGTGCAAGATTATTACATCAAGAAAGGTACGACGAACTTGGGGTTTTGTTGAAACCGTTTGGACCCGGGAAAGCTTCCCCAAGAGAAACTGCTATTTGGTTGAGCAAGAGTTTCAAAGAGAACACTTTGAACCGAGAACAATCAGTGTAA 4065 0.4175 MFDGVPEPVAAEQLFHQFIAPTTTRTTSSTPPPPLPSPTHHHHLSSSSLFPMLHHASPTPHNNNNTTTTTTFLPPFDPYNTSSHQSHHHHQILPLQPQHSLLFHPLQHHKDNAEQQEMKEPTIINNFDTHHHQRDQQQRQLLPDGDDGDDDNELMMMGSSSSSWTNDEVLALLRIRSTMEISWFPELTTWDHVSRKLAELGFIKSAEKCKEKFEDESRYFNTSIINCSKNNNNNNYRFLSELEELYQGTASDHNNSNSNNNQNIDSHHHVATEKTAHQLEDHHMMGHHHQALEEDSLIKQSEEESADKTNNIIIVEKSTTSDEKRKRKKRKRSSMRFEMFKGFCESIVNRMMAQQEEIHNKLLEDMMRRDQEKFAREEAWKKQEMEKMNKELEIMAQEQAIAGDRQATIIQFLKKCAAANNSQNSNKDPKQNGSTTTNNYYSCPPPSLHSQNPNPSTGESTLLEPITTTTSSNMIILDNHQVHQATCSSPIPEENLNPSSSSTLQVLPSPSSSSTPPNIISKQDSNPPPESNSISTLFKPSSSSNTNNSITDDDHHQKDDVGRRWPRDEVLALINLRCTILKNNNNSSNNELEKAEGNNINNQNKVVPLWERISQGMAELGYKRGAKRCKEKWENINKYFRKTKDANKKRSIDSRTCPYFHQLRNLYSDQGKLLDDAPPQENQKVNSNSSGQLLAAESSSHQVGSAELFSTLNDDNDIDDHGGEGNLIPVDVMEQYEVLEQIGKGAFGSALLVKHKHEKKKYVLKKIRLARQSERSRRSAHQEMELISKLRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVMFPEEKLCKWLVQLLMALDYLHMNHILHRDVKCSNIFLTKDHDIRLGDFGLAKMLTSDDLTSSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMSSLKPAFKAFDIQALIIKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLGHPHLQPYVLKIHLKMNSPRRNTLPGHWPESNYMKKTRFLSSEDDPASIYRDTWHSSFSNDRNLNPSISGAGQDSHCSTLEIDCMPDDLNQRLAELSVRDSHEVKSVHKPVVSRTPSTAKTSRLTSSKAYATPKKSMEPSKNPKALPVSHSTKLPSHTPSRRASLPAPRSGSIQKSHHRPSVGLLDHVNSPNVSVNAPRIDKIAEFPLASYEEHLFPITRPSSTSAQGSTCSPPRGSDSTMIDKCTIEVCDRAYIKPRSTDAWQGIKRNMLKNDEVKSSSSDQNATAGASSNNSSDLRRRQFDTSSFQQRAEALEGLLEFSARLLHQERYDELGVLLKPFGPGKASPRETAIWLSKSFKENTLNREQSV* 1355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0906 1354 MobiDBLite consensus disorder prediction 1130 1162 - -
Aev06g0906 1354 MobiDBLite consensus disorder prediction 1204 1223 - -
Aev06g0906 1354 Pfam Protein kinase domain 736 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0906 1354 MobiDBLite consensus disorder prediction 131 161 - -
Aev06g0906 1354 ProSitePatterns Protein kinases ATP-binding region signature. 742 765 IPR017441 GO:0005524
Aev06g0906 1354 Gene3D Transferase(Phosphotransferase) domain 1 816 1005 - -
Aev06g0906 1354 MobiDBLite consensus disorder prediction 1085 1172 - -
Aev06g0906 1354 ProSiteProfiles Protein kinase domain profile. 736 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0906 1354 MobiDBLite consensus disorder prediction 301 333 - -
Aev06g0906 1354 MobiDBLite consensus disorder prediction 23 45 - -
Aev06g0906 1354 PANTHER SERINE/THREONINE-KINASE NEK4 733 1339 - -
Aev06g0906 1354 MobiDBLite consensus disorder prediction 485 562 - -
Aev06g0906 1354 Gene3D Phosphorylase Kinase; domain 1 717 815 - -
Aev06g0906 1354 MobiDBLite consensus disorder prediction 1259 1289 - -
Aev06g0906 1354 SUPERFAMILY Protein kinase-like (PK-like) 732 1051 IPR011009 -
Aev06g0906 1354 CDD STKc_Nek 735 990 - -
Aev06g0906 1354 Gene3D - 565 642 - -
Aev06g0906 1354 Gene3D - 164 222 - -
Aev06g0906 1354 MobiDBLite consensus disorder prediction 671 697 - -
Aev06g0906 1354 MobiDBLite consensus disorder prediction 1261 1289 - -
Aev06g0906 1354 Coils Coil 382 402 - -
Aev06g0906 1354 MobiDBLite consensus disorder prediction 1096 1118 - -
Aev06g0906 1354 MobiDBLite consensus disorder prediction 485 550 - -
Aev06g0906 1354 SMART serkin_6 736 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0906 1354 MobiDBLite consensus disorder prediction 131 145 - -
Aev06g0906 1354 Pfam Myb/SANT-like DNA-binding domain 162 244 IPR044822 -
Aev06g0906 1354 Pfam Myb/SANT-like DNA-binding domain 563 665 IPR044822 -
Aev06g0906 1354 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 733 1339 - -
Aev06g0906 1354 MobiDBLite consensus disorder prediction 420 463 - -
Aev06g0906 1354 MobiDBLite consensus disorder prediction 51 70 - -
Aev06g0906 1354 MobiDBLite consensus disorder prediction 680 697 - -
Aev06g0906 1354 CDD GT1 563 644 - -
Aev06g0906 1354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 857 869 IPR008271 GO:0004672|GO:0006468
Aev06g0906 1354 Coils Coil 578 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0906 Aev-Chr6 6134722 6149971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0906 164 668 Trihelix Transcription Factor Family AT5G28300 40.706 1.63e-87 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Aev06g0906 Pkinase 1.8e-62 CL0016
TF Trihelix Aev06g0906 Pkinase 1.8e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0906 K08857 - gmx:100796019 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0906 06 6134722 6149971 Aev06g0906 06 6134722 6149971 ECH
Aev06g0906 06 6134722 6149971 Aev02g0909 02 8097517 8117193 PCT