Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0879 ATGGGGTGTGTGATTGGTCGTGAAGTGTCTTCGGGGATTGTCTCAGAGGTGAAGGAGGAGAAGAATTTGAGTGCTGAGTCTAAAAGGAATGTTGATGGAGGCTCTGTTAGAAAAAATGAGGTAGTGGTTCAGGATCAGAATGGTGGGAACCACAAGGAGAGGGAGAAGGAGAAGGAAGAGAAGGTTGGTGGTGGTGGTGGTGATGATGATGATGGGGTTCAGCAGGTTCAGGTTCAGAAGCCAAGAGGTGAAAGGAGAAGATCGAAGCCAAATCCGAGGCTGAGCAATCCGCCCAAGCATTTGAGGGGGGAGCAGGTTGCAGCTGGGTGGCCACCCTGGCTCACTGCTGTGTGTGGGGAAGCACTCAATGGCTGGATTCCTCGGAAGGCCGACACATTCGAGAAGATTGATAAGATCGGGCAAGGAACTTATAGTAATGTGTACAAAGCTAAAGACACATTGACAGGTAAAATTGTTGCTCTAAAGAAGGTTCGGTTTGACAATCTGGAACCTGAGAGCGTAAAATTCATGGCTAGAGAGATCCTTATTTTGCGGAGATTGGATCATCCCAATGTCGTAAAGTTGCAAGGTTTAGTCACATCAAGAATGTCCTGTAGTCTGTATCTGGTGTTTGACTACATGGTGCATGATTTAGCTGGACTTGCCGCAAGCCCAGGAATCAGGTTCACAGAGCCTCAGGTTAAATGTTACATGCATCAGCTGCTATCTGGACTTGAGCACTGTCATCACCGCCGTGTGCTTCACCGTGACATTAAAGGATCAAATCTTCTTATTGATAATGAAGGAATACTTAAGATTGCTGACTTTGGACTGGCATCTTTGTTTGACCCAAACCATAAGCATCCCATGACTAGTCGTGTAGTAACCCTTTGGTATCGGCCTCCTGAGTTGCTGCTCGGTGCCACTGATTATGGCGTGGGTGTAGACCTATGGAGTGCTGGATGTATTTTAGGAGAGTTATTGGCTGGGAAGCCAATTATGCCTGGTCGTACAGAGGTGGAGCAACTGCATAAGATATACAAACTATGTGGTTCACCTTCCGATGAGTATTGGAAGAAGTCAAAGTTGCCCAATGCTACCTTGTTTAAACCTCGAGAGCCATACAAGAGATGCATAAGAGAGATATTCAAAGATTTTCCACCTTCTGCTCTACCCCTTATCGACACTCTTCTTGCAATTGATCCTGCAGAACGGAAAACTGCCTCAGATGCTTTGAGAAGTGAGTTCTTCACCACAGAACCTTATGCTTGCGATCCCTCTAGTCTTCCAAAATATCCCCCGAGCAAGGAAATGGATGCTAAACGACGGGATGATGAAGCCAGGAGACTAAGAGCTGCAAGCAAAGCTCAGGCAAATGGTCCAAAGAAGCATCGTTCGCGTGATCGTGCTATGAAAGCTATGCCTGCCCCTGAAGCCAATGCAGAGATTCAATCCAACATTGATAGGAGACGCCTAATCACTCATGCAAATGCTAAGAGCAAGAGTGAAAAATTCCCTCCACCTCATCAAGATGGACAAGTTGGCATTCCTTTGGGATCTTCACATCACATTGATCCAGATACAGTTCCTACCGATGTCTCCTTCACTTCAACCACATACACTTTTTCAAAGGAACAATTCCAAGCTTGGTCAGGTCCAATTGGTAATGCTGCTGAAATTGGAGTGCCAAAGCAGAAGAAACTCTTTTCAGGTGTCAGTGATGCATTGGATTTATCAAGACCTCATAAAGGTGCTCACAAGGATAGAGTTAAAGGAAAGAAAATCATAGCTTAG 1794 0.4571 MGCVIGREVSSGIVSEVKEEKNLSAESKRNVDGGSVRKNEVVVQDQNGGNHKEREKEKEEKVGGGGGDDDDGVQQVQVQKPRGERRRSKPNPRLSNPPKHLRGEQVAAGWPPWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLQGLVTSRMSCSLYLVFDYMVHDLAGLAASPGIRFTEPQVKCYMHQLLSGLEHCHHRRVLHRDIKGSNLLIDNEGILKIADFGLASLFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRCIREIFKDFPPSALPLIDTLLAIDPAERKTASDALRSEFFTTEPYACDPSSLPKYPPSKEMDAKRRDDEARRLRAASKAQANGPKKHRSRDRAMKAMPAPEANAEIQSNIDRRRLITHANAKSKSEKFPPPHQDGQVGIPLGSSHHIDPDTVPTDVSFTSTTYTFSKEQFQAWSGPIGNAAEIGVPKQKKLFSGVSDALDLSRPHKGAHKDRVKGKKIIA* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0879 597 PANTHER OS01G0367700 PROTEIN 68 565 - -
Aev06g0879 597 MobiDBLite consensus disorder prediction 47 67 - -
Aev06g0879 597 Gene3D Phosphorylase Kinase; domain 1 120 215 - -
Aev06g0879 597 SMART serkin_6 133 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0879 597 MobiDBLite consensus disorder prediction 435 452 - -
Aev06g0879 597 Pfam Protein kinase domain 133 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0879 597 ProSiteProfiles Protein kinase domain profile. 133 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g0879 597 CDD STKc_CDK9_like 133 417 - -
Aev06g0879 597 SUPERFAMILY Protein kinase-like (PK-like) 127 424 IPR011009 -
Aev06g0879 597 MobiDBLite consensus disorder prediction 13 35 - -
Aev06g0879 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Aev06g0879 597 Gene3D Transferase(Phosphotransferase) domain 1 216 457 - -
Aev06g0879 597 MobiDBLite consensus disorder prediction 1 106 - -
Aev06g0879 597 PANTHER CELL DIVISION PROTEIN KINASE 68 565 - -
Aev06g0879 597 ProSitePatterns Protein kinases ATP-binding region signature. 139 162 IPR017441 GO:0005524
Aev06g0879 597 MobiDBLite consensus disorder prediction 425 486 - -
Aev06g0879 597 MobiDBLite consensus disorder prediction 577 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0879 Aev-Chr6 5954723 5958160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0879 125 457 Core Cell Cycle Gene Families AT5G10270 53.009 7.03e-123 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Aev06g0879 Pkinase 9.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0879 K08819 - gmx:100786837 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0879 06 5954723 5958160 Aev09g1330 09 17118146 17124184 ECH
Aev06g0879 06 5954723 5958160 Aev06g0879 06 5954723 5958160 ECH