Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0844 ATGTGTTTACCAGAGGGAGAGAAGGACAGGGAGAGAGCCATGGCACTCGAAGCTATGCTCTATGCTCAGCAACCACAAGACCACCCTTTTGCTACTAATAACAATAAGGACTTATTGTTACTCTTCGACAACAATAATACCAACAGCAACAACTATGACTTGTTACTACAAGGTTGTTGTGGTGGTGGATCAAACAACAACAACAATAACAATAACTTGTTGTGGGGCTATGGTGGGAGTGATGAAGATTTCAACAGCCTCATGAGCATTCAAAAACAGGAAGAAGGTGATGACCAACAACAAGGAGGCTCTATGACTACTTTTCTGGACAACCAAACTACTGATGATCCGATGTTTCCTAATTATGAAGATTGGAGCAACAGCAACAATTGCTCAACGTTGCCCAACAACCGTTTGAGTAATGTCTCCAATGAGGAGGCCACTGCTTTGATGGAAGGGTCAACTTCTCTTGCGGCGGCGCGCCCCAAGAAGCGCAGAACAAAGAGCAGGAAGAACAAGGAAGAGATTGAGAACCAGAGGATGACTCACATTGCTGTTGAGCGCAATCGAAGAAAGCAAATGAATGAGTATCTCTCTGTTCTTCGCTCTCTCATGCCTGAATCTTACGTCCAAAGGGGTGATCAAGCATCTATAATTGGGGGTGCTATTAACTATGTGAAGGAGCTTGAGCAGAGGCTGCAGTTTTTTGGTGTGAAGAAAGAAGCCGATGGAGATGGTGGATCTGATCAAGGTGCAAATATGCCCTTTTCCGAGTTCTTTGCCTTCCCTCAGTACTCATCAACAAGTGGTGGTGGTGGTGGGGGTGAAAGTTCTACGGCGGCGGCGACAACGGGTGAGCGAGCGAGTGAGGTTAAGGCTGCAGGCATTGCAGATATAGAAGTGACAATGGTGGAGAGCCATGCAAATCTCAAGATAAGGGCCAAGAAACGGCCAAAGCAGCTCTTGAAGATGGTGTCTAGTTTGCATGGCATGCGCCTCACAATATTGCACCTTAATGTCACCACCACTGGGGATGTTGTCCTCTATTCTCTAAGTGTTAAGGTGGAAGATGATTGCAAGCTGGGATCAGTGGATGAGATAGCAGCAGCTGTGTACCAAATGCTGGATAGGATACAACAAGAGTCAATGAATGTGTTGAATTAG 1164 0.4596 MCLPEGEKDRERAMALEAMLYAQQPQDHPFATNNNKDLLLLFDNNNTNSNNYDLLLQGCCGGGSNNNNNNNNLLWGYGGSDEDFNSLMSIQKQEEGDDQQQGGSMTTFLDNQTTDDPMFPNYEDWSNSNNCSTLPNNRLSNVSNEEATALMEGSTSLAAARPKKRRTKSRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINYVKELEQRLQFFGVKKEADGDGGSDQGANMPFSEFFAFPQYSSTSGGGGGGESSTAAATTGERASEVKAAGIADIEVTMVESHANLKIRAKKRPKQLLKMVSSLHGMRLTILHLNVTTTGDVVLYSLSVKVEDDCKLGSVDEIAAAVYQMLDRIQQESMNVLN* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0844 387 PANTHER MAX DIMERIZATION, MAD 14 383 - -
Aev06g0844 387 Gene3D - 163 241 IPR036638 GO:0046983
Aev06g0844 387 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 178 238 IPR036638 GO:0046983
Aev06g0844 387 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 229 IPR011598 GO:0046983
Aev06g0844 387 MobiDBLite consensus disorder prediction 267 285 - -
Aev06g0844 387 SMART finulus 184 235 IPR011598 GO:0046983
Aev06g0844 387 Pfam Helix-loop-helix DNA-binding domain 179 230 IPR011598 GO:0046983
Aev06g0844 387 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 14 383 - -
Aev06g0844 387 MobiDBLite consensus disorder prediction 267 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0844 Aev-Chr6 5739578 5741119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0844 169 355 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 63.265 1.09e-72 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev06g0844 HLH 8.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0844 - - pvu:PHAVU_007G181900g 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0844 06 5739578 5741119 Aev06g0844 06 5739578 5741119 ECH
Aev06g0844 06 5739578 5741119 Aev02g0910 02 8122507 8123409 PCT